RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZNF585AQ6P3V2 769 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 NUDCD3Q8IVD9 361 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 OR4N2Q8NGD1 307 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 CLHC1Q8NHS4 586 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 NEIL3Q8TAT5 605 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 SARAFQ96BY9 339 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 ELP4Q96EB1 424 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 C3orf30Q96M34 536 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 REEP4Q9H6H4 257 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 GALNT9Q9HCQ5 603 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 ACAD8Q9UKU7 415 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 EXPH5Q8NEV8 1989 aa17.88■□□□□ 0.45
SNX5-213ENST00000486039 WDR91A4D1P6 747 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 C2orf72A6NCS6 295 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 OR6C70A6NIJ9 312 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 GNB5O14775 395 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 AKAP10O43572 662 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 TSPAN2O60636 221 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 TBX19O60806 448 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 ICOSLGO75144 302 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 COQ9O75208 318 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 LYPLA1O75608 230 aaPredicted RBP17.87■□□□□ 0.45
SNX5-213ENST00000486039 REM1O75628 298 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 PSMG1O95456 288 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 TRPC1P48995 793 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 PSG6Q00889 435 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 MPP2Q14168 576 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 TIGD3Q6B0B8 471 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 RTL6Q6ICC9 239 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 TMEM211Q6ICI0 200 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 SLC30A6Q6NXT4 461 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 ZNF551Q7Z340 670 aaPredicted RBP17.87■□□□□ 0.45
SNX5-213ENST00000486039 SLC44A2Q8IWA5 706 aaPredicted RBP17.87■□□□□ 0.45
SNX5-213ENST00000486039 OR2L13Q8N349 312 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 CIDECQ96AQ7 238 aaPredicted RBP17.87■□□□□ 0.45
SNX5-213ENST00000486039 SDCCAG3Q96C92 435 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 SLC35A4Q96G79 324 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 ZNF764Q96H86 408 aaPredicted RBP17.87■□□□□ 0.45
SNX5-213ENST00000486039 COL21A1Q96P44 957 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 ADOQ96SZ5 270 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 OSBPL11Q9BXB4 747 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 CENPHQ9H3R5 247 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 ZNF395Q9H8N7 513 aaPredicted RBP17.87■□□□□ 0.45
SNX5-213ENST00000486039 C15orf41Q9Y2V0 281 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 FAM215AQ9Y5M1 114 aa17.87■□□□□ 0.45
SNX5-213ENST00000486039 APCP25054 2843 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 DNAJC13O75165 2243 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 C19orf84I3L1E1 186 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 ITM2AO43736 263 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 HPNP05981 417 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 DHRS4L1P0CG22 281 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 BCKDHAP12694 445 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 ACVR2AP27037 513 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 PTPN6P29350 595 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 PTGER4P35408 488 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 CDK9P50750 372 aaKnown RBP17.86■□□□□ 0.45
SNX5-213ENST00000486039 NUP107P57740 925 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 PMPCAQ10713 525 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 ZNF155Q12901 538 aaPredicted RBP17.86■□□□□ 0.45
SNX5-213ENST00000486039 SNTA1Q13424 505 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 PDE7AQ13946 482 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 ANGPTL8Q6UXH0 198 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 PPCDCQ96CD2 204 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 PPP3R2Q96LZ3 170 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 KLRF1Q9NZS2 232 aa17.86■□□□□ 0.45
SNX5-213ENST00000486039 CSMD1Q96PZ7 3565 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 PRAMEF25A6NGN4 478 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 FIGNL2A6NMB9 653 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 SNPHO15079 494 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 TM9SF1O15321 606 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 PDPK1O15530 556 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 ABCB7O75027 752 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 PEX11AO75192 247 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 SKAP2O75563 359 aaPredicted RBP17.85■□□□□ 0.45
SNX5-213ENST00000486039 TRAPPC6AO75865 159 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 COX6B1P14854 86 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 FRKP42685 505 aaPredicted RBP17.85■□□□□ 0.45
SNX5-213ENST00000486039 HSPB3Q12988 150 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 CHI3L2Q15782 390 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 WLSQ5T9L3 541 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 LARP4Q71RC2 724 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNX5-213ENST00000486039 WDR53Q7Z5U6 358 aaPredicted RBP17.85■□□□□ 0.45
SNX5-213ENST00000486039 LIX1Q8N485 282 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 OR1J4Q8NGS1 313 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 RND1Q92730 232 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 TMCO6Q96DC7 493 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 PGM2Q96G03 612 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 PCNX1Q96RV3 2341 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 C20orf27Q9GZN8 174 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 DDX18Q9NVP1 670 aaKnown RBP17.85■□□□□ 0.45
SNX5-213ENST00000486039 COQ3Q9NZJ6 369 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 SH3BP4Q9P0V3 963 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 RNF6Q9Y252 685 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 ACTL7BQ9Y614 415 aa17.85■□□□□ 0.45
SNX5-213ENST00000486039 BIRC5O15392 142 aa17.84■□□□□ 0.45
SNX5-213ENST00000486039 WDR1O75083 606 aa17.84■□□□□ 0.45
SNX5-213ENST00000486039 SERPINE1P05121 402 aa17.84■□□□□ 0.45
SNX5-213ENST00000486039 SNRPB2P08579 225 aaKnown RBP17.84■□□□□ 0.45
SNX5-213ENST00000486039 IFI6P09912 130 aa17.84■□□□□ 0.45
SNX5-213ENST00000486039 ELAVL4P26378 380 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms