RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 A0A1W2PRB8 838 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 WIPF3A6NGB9 483 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 PRAMEF25A6NGN4 478 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 BCKDKO14874 412 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 TO15178 435 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 UGT2B11O75310 529 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 TRIM3O75382 744 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 RFPL3SP0C7P2 107 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 CT45A8P0DMV1 189 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 CT45A9P0DMV2 189 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 KITP10721 976 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 PRPS1L1P21108 318 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 SOX18P35713 384 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 WDR4P57081 412 aaKnown RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 HYAL4Q2M3T9 481 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 LSM12Q3MHD2 195 aaKnown RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 CT45A2Q5DJT8 189 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 WLSQ5T9L3 541 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 TMEM211Q6ICI0 200 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF585AQ6P3V2 769 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 ANGPTL8Q6UXH0 198 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 RPTNQ6XPR3 784 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 MAMDC2Q7Z304 686 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 HDXQ7Z353 690 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 WDR53Q7Z5U6 358 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 OR2L13Q8N349 312 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 NATD1Q8N6N6 113 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 NUP43Q8NFH3 380 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 OR5M9Q8NGP3 310 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 GPR151Q8TDV0 419 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 HGDQ93099 445 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 SARAFQ96BY9 339 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 EFHD2Q96C19 240 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 TLCD1Q96CP7 247 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 DTNBP1Q96EV8 351 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF764Q96H86 408 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 GNRHR2Q96P88 292 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 NODALQ96S42 347 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 SORT1Q99523 831 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 NUF2Q9BZD4 464 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 C20orf27Q9GZN8 174 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 TP63Q9H3D4 680 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 AKTIPQ9H8T0 292 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 ACSS1Q9NUB1 689 aaPredicted RBP11.47□□□□□ -0.57
PTCD1-205ENST00000485746 THAP1Q9NVV9 213 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 QPCTLQ9NXS2 382 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 ATP6V1HQ9UI12 483 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 CBLCQ9ULV8 474 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 MAPRE3Q9UPY8 281 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 MEMO1Q9Y316 297 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 LIPGQ9Y5X9 500 aa11.47□□□□□ -0.57
PTCD1-205ENST00000485746 UBR5O95071 2799 aaPredicted RBP11.46□□□□□ -0.57
PTCD1-205ENST00000485746 OR14I1A6ND48 311 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 TTC36A6NLP5 189 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 E9PLN8 166 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 EMC8O43402 210 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 SUSD5O60279 629 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 HCN1O60741 890 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 ICOSLGO75144 302 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 KCNH1O95259 989 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 IGHG3P01860 377 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 CELA3AP09093 270 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 LAMP1P11279 417 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 G6PDP11413 515 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 GABRA3P34903 492 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 GCKP35557 465 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 CLK3P49761 638 aaKnown RBP11.46□□□□□ -0.57
PTCD1-205ENST00000485746 CDK9P50750 372 aaKnown RBP11.46□□□□□ -0.57
PTCD1-205ENST00000485746 SLC18A1P54219 525 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PNLIPRP2P54317 469 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PSMD4P55036 377 aaKnown RBP11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PRR5P85299 388 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 GAB1Q13480 694 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PDE7AQ13946 482 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PTGR1Q14914 329 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 SMU1Q2TAY7 513 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 VPS26BQ4G0F5 336 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 CYP27C1Q4G0S4 372 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 GXYLT1Q4G148 440 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 NPSR1Q6W5P4 371 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 FGD2Q7Z6J4 655 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 SLC9A6Q92581 669 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 TMEM41AQ96HV5 264 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 VKORC1Q9BQB6 163 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 DPY30Q9C005 99 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
PTCD1-205ENST00000485746 GALNT9Q9HCQ5 603 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
PTCD1-205ENST00000485746 NBASA2RRP1 2371 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms