RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 SNRPB2P08579 225 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ACP2P11117 423 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 SOX3P41225 446 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 MVDP53602 400 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 AP2B1P63010 937 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ZNF791Q3KP31 576 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ABHD17BQ5VST6 288 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 SPINK14Q6IE38 97 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ZNF621Q6ZSS3 439 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 SLC29A4Q7RTT9 530 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 PRR22Q8IZ63 422 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 LGI4Q8N135 537 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 AURKBQ96GD4 344 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 PANX1Q96RD7 426 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 TRIM45Q9H8W5 580 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 C3orf14Q9HBI5 128 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ZCCHC3Q9NUD5 404 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 PCDHB14Q9Y5E9 798 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
TRA2B-213ENST00000485530 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
TRA2B-213ENST00000485530 TRBV5-3A0A0A0MS03 114 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 RFXANKO14593 260 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 TO15178 435 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.61
TRA2B-213ENST00000485530 NEURL1O76050 574 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 POU3F2P20265 443 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-213ENST00000485530 UQCRC2P22695 453 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 GABRA3P34903 492 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 TRPC1P48995 793 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 RIPPLY3P57055 190 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 KCNK10P57789 538 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 DUSP5Q16690 384 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 PLEKHN1Q494U1 663 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-213ENST00000485530 NADK2Q4G0N4 442 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 COX20Q5RI15 118 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 C6orf163Q5TEZ5 329 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 IRAK1BP1Q5VVH5 260 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 SAXO2Q658L1 398 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 IL20RBQ6UXL0 311 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 MSANTD1Q6ZTZ1 278 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 MDGA2Q7Z553 956 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 SLC44A2Q8IWA5 706 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-213ENST00000485530 C10orf111Q8N326 155 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 POU5F2Q8N7G0 328 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 ANKS4BQ8N8V4 417 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 TEX19Q8NA77 164 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 GALNT11Q8NCW6 608 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 C17orf47Q8NEP4 570 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 FBXO30Q8TB52 745 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 SFXN5Q8TD22 340 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 TSPEARQ8WU66 669 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 PIK3R3Q92569 461 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 ITCHQ96J02 903 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 LCORQ96JN0 433 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-213ENST00000485530 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 HES7Q9BYE0 225 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 PRODH2Q9UF12 536 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 PCDHGB4Q9UN71 923 aa11.27□□□□□ -0.61
TRA2B-213ENST00000485530 OTOGQ6ZRI0 2925 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
TRA2B-213ENST00000485530 A0A096LPI6 279 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 RNF103-CHMP3A0A140T963 221 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 FRG2CA6NGY1 282 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 CCDC22O60826 627 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 COQ9O75208 318 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 NKX2-2O95096 273 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 UNC5CO95185 931 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 FBXO45P0C2W1 286 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 COL8A1P27658 744 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 ABCD3P28288 659 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 ADSLP30566 484 aaPredicted RBP11.26□□□□□ -0.61
TRA2B-213ENST00000485530 DCTP40126 519 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 TNFSF10P50591 281 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 HLCSP50747 726 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 SSR4P51571 173 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 TP53BP2Q13625 1128 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 LASP1Q14847 261 aaKnown RBP11.26□□□□□ -0.61
TRA2B-213ENST00000485530 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 LRIF1Q5T3J3 769 aa11.26□□□□□ -0.61
TRA2B-213ENST00000485530 DNAJC14Q6Y2X3 702 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms