RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CT45A8P0DMV1 189 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CT45A9P0DMV2 189 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CD99P14209 185 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CHN1P15882 459 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CHMP24386 653 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 TACR1P25103 407 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 PCYT1AP49585 367 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 PNLIPRP2P54317 469 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 PRKAA2P54646 552 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 HEPACAMQ14CZ8 416 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CT45A2Q5DJT8 189 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 TRMT10CQ7L0Y3 403 aaKnown RBP10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CTAGE4Q8IX94 777 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CCDC116Q8IYX3 515 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 UHMK1Q8TAS1 419 aaKnown RBP10.42□□□□□ -0.74
SCFD1-206ENST00000484733 ACMSDQ8TDX5 336 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 C16orf78Q8WTQ4 265 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 TMBIM1Q969X1 311 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 VSTM2LQ96N03 204 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 TMEM237Q96Q45 408 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 TUBA1CQ9BQE3 449 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 MAPRE3Q9UPY8 281 aa10.42□□□□□ -0.74
SCFD1-206ENST00000484733 CCDC151A5D8V7 595 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 TUBAL3A6NHL2 446 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 PCDH7O60245 1069 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 REM1O75628 298 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 HMOX2P30519 316 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 SLCO1A2P46721 670 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 MRPS22P82650 360 aaKnown RBP10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ERCC6LQ2NKX8 1250 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 TCHHL1Q5QJ38 904 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-206ENST00000484733 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 OR14L1PQ8NHC6 308 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 METTL6Q8TCB7 284 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ALPK1Q96QP1 1244 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ACPTQ9BZG2 426 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ACBD3Q9H3P7 528 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 PIGMQ9H3S5 423 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 LIME1Q9H400 295 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 FOLH1BQ9HBA9 442 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 SLC35C2Q9NQQ7 365 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 GIMAP4Q9NUV9 329 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 WIF1Q9Y5W5 379 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 DOCK7Q96N67 2140 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 C2orf72A6NCS6 295 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 HCRTR2O43614 444 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ERN1O75460 977 aaKnown RBP10.41□□□□□ -0.74
SCFD1-206ENST00000484733 SLITRK5O94991 958 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 TIA1P31483 386 aaKnown RBP eCLIP10.41□□□□□ -0.744e-8■■□□□ 11.9
SCFD1-206ENST00000484733 LHX2P50458 406 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 GAS1P54826 345 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 NAA20P61599 178 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 MRPS35P82673 323 aaKnown RBP10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ACSM2AQ08AH3 577 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 LCP2Q13094 533 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 GAB1Q13480 694 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 ACSM2BQ68CK6 577 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 AAGABQ6PD74 315 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 TRIM42Q8IWZ5 723 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 FAM9CQ8IZT9 166 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 APIPQ96GX9 242 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 C16orf45Q96MC5 204 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-206ENST00000484733 HBEGFQ99075 208 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 PFDN4Q9NQP4 134 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 CLCF1Q9UBD9 225 aa10.41□□□□□ -0.74
SCFD1-206ENST00000484733 WBP11Q9Y2W2 641 aaKnown RBP10.41□□□□□ -0.74
SCFD1-206ENST00000484733 MYO1GB0I1T2 1018 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 H0Y3Z8 333 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 H3BQF6 201 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 MPIP34949 423 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 HTR6P50406 440 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 PAMR1Q6UXH9 720 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 NPSR1Q6W5P4 371 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 IFNEQ86WN2 208 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 OR9A2Q8NGT5 310 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 DACH2Q96NX9 599 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 TAS2R10Q9NYW0 307 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 TAS2R7Q9NYW3 318 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 GRID1Q9ULK0 1009 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 A0A087WV62 115 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 GNG14A0A1W2PPG7 69 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 CLCA1A8K7I4 914 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 CRHP06850 196 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 IFI6P09912 130 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 KRT20P35900 424 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 DGKQP52824 942 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 FAM219BQ5XKK7 198 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 FAM180BQ6P0A1 224 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 LARP4Q71RC2 724 aaKnown RBP eCLIP10.4□□□□□ -0.74
SCFD1-206ENST00000484733 FAM76AQ8TAV0 307 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 KAT2AQ92830 837 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.74
SCFD1-206ENST00000484733 CCDC126Q96EE4 140 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 ADOQ96SZ5 270 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 G6PC3Q9BUM1 346 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 RBM24Q9BX46 236 aaKnown RBP10.4□□□□□ -0.74
SCFD1-206ENST00000484733 TAS2R9Q9NYW1 312 aa10.4□□□□□ -0.74
SCFD1-206ENST00000484733 CELSR1Q9NYQ6 3014 aa10.4□□□□□ -0.75
SCFD1-206ENST00000484733 EEF1E1-BLOC1S5C9J1V9 151 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms