RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 OR2B2Q9GZK3 357 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 CXXC4Q9H2H0 198 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 GSTO2Q9H4Y5 243 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 PFDN4Q9NQP4 134 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 NMRK1Q9NWW6 199 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 KLRF1Q9NZS2 232 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 JKAMPQ9P055 326 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 EMCNQ9ULC0 261 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 NAV3Q8IVL0 2385 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 FLNAP21333 2647 aaKnown RBP16.36■□□□□ 0.21
ATG4B-221ENST00000483778 A0A1W2PPM1 405 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 RIPK2O43353 540 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 CBR3O75828 277 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 ACTL6AO96019 429 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 HSD3B1P14060 373 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 DRD2P14416 443 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 TAC1P20366 129 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 ATP5F1P24539 256 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-221ENST00000483778 HSD3B2P26439 372 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 HMOX2P30519 316 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 GAS1P54826 345 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 GFRA1P56159 465 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 DCAF7P61962 342 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 SNTA1Q13424 505 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 DAZAP2Q15038 168 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-221ENST00000483778 GLE1Q53GS7 698 aaKnown RBP16.36■□□□□ 0.21
ATG4B-221ENST00000483778 ADGRE4PQ86SQ3 457 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 OR14L1PQ8NHC6 308 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 VSTM2LQ96N03 204 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 BTBD9Q96Q07 612 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 FOXC2Q99958 501 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 FOLH1BQ9HBA9 442 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 TNFRSF12AQ9NP84 129 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 SLC35C2Q9NQQ7 365 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 FLRT3Q9NZU0 649 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 PRODH2Q9UF12 536 aa16.36■□□□□ 0.21
ATG4B-221ENST00000483778 GNG14A0A1W2PPG7 69 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 OR6C70A6NIJ9 312 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 EEF1E1-BLOC1S5C9J1V9 151 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 EEF1E1O43324 174 aaKnown RBP16.35■□□□□ 0.21
ATG4B-221ENST00000483778 ABHD2P08910 425 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 RHOXF2BP0C7M4 288 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 TMIGD3P0DMS9 266 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-221ENST00000483778 PYGBP11216 843 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 CYP4B1P13584 511 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 LHX2P50458 406 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 PLCZ1Q86YW0 608 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 RNF138Q8WVD3 245 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 EFHD2Q96C19 240 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-221ENST00000483778 L3HYPDHQ96EM0 354 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 SLC35A4Q96G79 324 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 TXLNGYQ9BZA5 131 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 RTN4RQ9BZR6 473 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 C12orf65Q9H3J6 166 aaKnown RBP16.35■□□□□ 0.21
ATG4B-221ENST00000483778 TAS2R10Q9NYW0 307 aa16.35■□□□□ 0.21
ATG4B-221ENST00000483778 NUP214P35658 2090 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 CLCA1A8K7I4 914 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 G3V2L1 256 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 CDH16O75309 829 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 ERN1O75460 977 aaKnown RBP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 ANXA4P09525 319 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 EPXP11678 715 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 TIA1P31483 386 aaKnown RBP eCLIP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 DGKQP52824 942 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 B3GALT5-AS1P59052 145 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 ACSM2AQ08AH3 577 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 SLC29A2Q14542 456 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 LGSNQ5TDP6 509 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 ACSM2BQ68CK6 577 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 LARP4Q71RC2 724 aaKnown RBP eCLIP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 SLC44A2Q8IWA5 706 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 GCNT2Q8N0V5 402 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 MNS1Q8NEH6 495 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 INTS12Q96CB8 462 aaKnown RBP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 MTBPQ96DY7 904 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 TBK1Q9UHD2 729 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 RPH3AQ9Y2J0 694 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-221ENST00000483778 WIF1Q9Y5W5 379 aa16.34■□□□□ 0.21
ATG4B-221ENST00000483778 PRR14LQ5THK1 2151 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 A0A1W2PPR1 153 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 TUBAL3A6NHL2 446 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 PLOD2O00469 737 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 RCBTB2O95199 551 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 TGM6O95932 706 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 IL18BPO95998 194 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 CD99P14209 185 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 OPRM1P35372 400 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 CLDN18P56856 261 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 C2orf80Q0P641 193 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 RCAN2Q14206 197 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 SF3B4Q15427 424 aaKnown RBP eCLIP16.33■□□□□ 0.26e-9■■■□□ 18.7
ATG4B-221ENST00000483778 GALNT18Q6P9A2 607 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 SH2D5Q6ZV89 423 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 TRMT10CQ7L0Y3 403 aaKnown RBP16.33■□□□□ 0.2
ATG4B-221ENST00000483778 LUZP2Q86TE4 346 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 CCNYL1Q8N7R7 359 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 GBP7Q8N8V2 638 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-221ENST00000483778 GOT1L1Q8NHS2 421 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms