RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CTSKP43235 329 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 IDH2P48735 452 aaKnown RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 AFF3P51826 1226 aaKnown RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 PPP1CAP62136 330 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 ST3GAL3Q11203 375 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 MAP4K2Q12851 820 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 ZNHIT3Q15649 155 aaPredicted RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 ZSWIM7Q19AV6 140 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 PRICKLE4Q2TBC4 344 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 INAVAQ3KP66 663 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 EXOSC6Q5RKV6 272 aaKnown RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 GTF2IRD2BQ6EKJ0 949 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 PGBD2Q6P3X8 592 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 FRRS1Q6ZNA5 592 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 PRSS41Q7RTY9 318 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 GTF2IRD2Q86UP8 949 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 ZNF619Q8N2I2 560 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 ARHGEF39Q8N4T4 335 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 SLC16A11Q8NCK7 471 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 OR4D11Q8NGI4 311 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 OR6T1Q8NGN1 323 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 OR9A4Q8NGU2 314 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 C1orf216Q8TAB5 229 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 GNPDA2Q8TDQ7 276 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 TRUB1Q8WWH5 349 aaKnown RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 CDS1Q92903 461 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 OTUB1Q96FW1 271 aaPredicted RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 ZNF578Q96N58 590 aaPredicted RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 MAP3K3Q99759 626 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 LHPPQ9H008 270 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 ERVMER34-1Q9H9K5 563 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 KRCC1Q9NPI7 259 aaPredicted RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 SOHLH2Q9NX45 425 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 FTSJ1Q9UET6 329 aa11.15□□□□□ -0.62
SND1-210ENST00000483503 WARS2Q9UGM6 360 aaKnown RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
SND1-210ENST00000483503 SCN3AQ9NY46 2000 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 TDRD6O60522 2096 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 TRIM64BA6NI03 449 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 CLCA1A8K7I4 914 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 H3BMQ9 156 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 SOX1O00570 391 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 BCAT2O15382 392 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 CTNSO60931 367 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 LDB3O75112 727 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 OR5F1O95221 314 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 ZBTB11O95625 1053 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 POU2F1P14859 743 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 CCNA2P20248 432 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 CHMP24386 653 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 ST13P50502 369 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 PDX1P52945 283 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 SNRPGP62308 76 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 POU6F2P78424 691 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 ZP2Q05996 745 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 STX4Q12846 297 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.63
SND1-210ENST00000483503 DUSP8Q13202 625 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 PIN1Q13526 163 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 DUSP5Q16690 384 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 DEFB133Q30KQ1 61 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 DEFB110Q30KQ9 67 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 TRMT12Q53H54 448 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 SLX4IPQ5VYV7 408 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 PODNL1Q6PEZ8 512 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 PTCHD4Q6ZW05 846 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 RRM2BQ7LG56 351 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 RANBP3LQ86VV4 465 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 VRK2Q86Y07 508 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 RBM45Q8IUH3 476 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 VWA5B2Q8N398 1253 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 OR4K5Q8NGD3 323 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 OR5T3Q8NGG3 340 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 C9orf43Q8TAL5 461 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 APH1BQ8WW43 257 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 AHCYL2Q96HN2 611 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 COG8Q96MW5 612 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 SDF2Q99470 211 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 COPS4Q9BT78 406 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 ZNF350Q9GZX5 532 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 SAP130Q9H0E3 1048 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 GPN2Q9H9Y4 310 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 STARD5Q9NSY2 213 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 PAK1IP1Q9NWT1 392 aaPredicted RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 IRAK4Q9NWZ3 460 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 CNOT2Q9NZN8 540 aaKnown RBP11.14□□□□□ -0.63
SND1-210ENST00000483503 NDOR1Q9UHB4 597 aa11.14□□□□□ -0.63
SND1-210ENST00000483503 PSORS1C1Q9UIG5 152 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms