RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZCCHC12Q6PEW1 402 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 CDRT4Q8N9R6 151 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 GLB1L3Q8NCI6 653 aaPredicted RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 SPPL2AQ8TCT8 520 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 FAM120BQ96EK7 910 aaKnown RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 COL21A1Q96P44 957 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 Q9N2J8 555 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 EQTNQ9NQ60 294 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 SIRT3Q9NTG7 399 aaPredicted RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 ZCCHC3Q9NUD5 404 aaKnown RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 SEC14L3Q9UDX4 400 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 MRTO4Q9UKD2 239 aaKnown RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 CNOT11Q9UKZ1 510 aaKnown RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 NPIPA1Q9UND3 350 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 A0A0G2JMM0 328 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 A0A1W2PPB8 328 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 A0A1W2PRS3 328 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 PINLYPA6NC86 204 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 KIR3DP1A8MWS1 328 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 TFECO14948 347 aaPredicted RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 EDF1O60869 148 aaKnown RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 ABCB7O75027 752 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 SLC22A3O75751 556 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 GABRA3P34903 492 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 DNASE1L1P49184 302 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 CCT3P49368 545 aaKnown RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 WNT3P56703 355 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 MRPS22P82650 360 aaKnown RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 MRPL49Q13405 166 aaKnown RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 GAB1Q13480 694 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 FAM174BQ3ZCQ3 159 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 SPANXN4Q5MJ08 99 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 PRAMEF20Q5VT98 475 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 BHLHB9Q6PI77 547 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 OR4N2Q8NGD1 307 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 OR56A1Q8NGH5 318 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 MOAP1Q96BY2 351 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 TMCO6Q96DC7 493 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 SLC35A4Q96G79 324 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 TEX37Q96LM6 180 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 ADOQ96SZ5 270 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 CCDC28BQ9BUN5 200 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 CXorf36Q9H7Y0 433 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 IL1RL2Q9HB29 575 aa19.21■□□□□ 0.67
SEC13-217ENST00000482647 SDR39U1Q9NRG7 319 aaPredicted RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.21■□□□□ 0.67
SEC13-217ENST00000482647 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 ACOT7O00154 380 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 UGT2B11O75310 529 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 UNC5CO95185 931 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 SNX4O95219 450 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 IL12BP29460 328 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 UQCRFS1P47985 274 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 PRIM2P49643 509 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 PNLIPRP2P54317 469 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 PPIAP62937 165 aaKnown RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 HBA1P69905 142 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 EFR3AQ14156 821 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 DECR1Q16698 335 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 MFSD12Q6NUT3 480 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 GFRALQ6UXV0 394 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 BNC2Q6ZN30 1099 aaPredicted RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 WDR53Q7Z5U6 358 aaPredicted RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 SLC22A16Q86VW1 577 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 SIAH3Q8IW03 269 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 CLECL1Q8IZS7 167 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 MIER2Q8N344 545 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 GPR151Q8TDV0 419 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 HOXB13Q92826 284 aaPredicted RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 HGDQ93099 445 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 GIMAP5Q96F15 307 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 MARK4Q96L34 752 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 GPR137Q96N19 417 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 DOHHQ9BU89 302 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 ANGPTL4Q9BY76 406 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 TTTY12Q9BZ98 90 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 TSPAN10Q9H1Z9 355 aaPredicted RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 PROK2Q9HC23 129 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 TUBA8Q9NY65 449 aaPredicted RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 ZIM2Q9NZV7 527 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 CBLCQ9ULV8 474 aa19.2■□□□□ 0.66
SEC13-217ENST00000482647 BOKQ9UMX3 212 aaPredicted RBP19.2■□□□□ 0.66
SEC13-217ENST00000482647 RELNP78509 3460 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 TENM4Q6N022 2769 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 ASNA1O43681 348 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 TSPAN2O60636 221 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 SCN2BO60939 215 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 GLSO94925 669 aaPredicted RBP19.19■□□□□ 0.66
SEC13-217ENST00000482647 CASP3P42574 277 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 PHC1P78364 1004 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 FOXO1Q12778 655 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 SNTA1Q13424 505 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 PACS2Q86VP3 889 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 OR4A15Q8NGL6 344 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 SFXN5Q8TD22 340 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 SLC9A6Q92581 669 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 C16orf58Q96GQ5 468 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 EBF4Q9BQW3 602 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 SIKE1Q9BRV8 207 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 METTL7AQ9H8H3 244 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms