RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ARRB2P32121 409 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 SLC1A4P43007 532 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 CDX1P47902 265 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 LHX1P48742 406 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 PCYT1AP49585 367 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 ASCL1P50553 236 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 CYP2J2P51589 502 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 LIMK2P53671 638 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 MAPK12P53778 367 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 HNRNPH2P55795 449 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 MAT1AQ00266 395 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 SREBF2Q12772 1141 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 SNTA1Q13424 505 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 HSPB2Q16082 182 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 PSG3Q16557 428 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 ACKR1Q16570 336 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 EXOC3L4Q17RC7 722 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 ZNF691Q5VV52 312 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 GPR107Q5VW38 600 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 KHDRBS2Q5VWX1 349 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 PAPD7Q5XG87 772 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 ALS2CLQ60I27 953 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 OR52W1Q6IF63 320 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 PRR27Q6MZM9 219 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 CAPN13Q6MZZ7 669 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 FAM151BQ6UXP7 276 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 ARCQ7LC44 396 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 IRF2BP2Q7Z5L9 587 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 SLC51BQ86UW2 128 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 CBWD2Q8IUF1 395 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 NUDCD3Q8IVD9 361 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 ZC3H3Q8IXZ2 948 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 TDHQ8IZJ6 230 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 GABRG1Q8N1C3 465 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 MUC20Q8N307 709 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 MARVELD2Q8N4S9 558 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 TEX26Q8N6G2 289 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 GATSQ8NAP1 163 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 FBXO36Q8NEA4 188 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 OR4C5Q8NGB2 326 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 VANGL1Q8TAA9 524 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 NTN5Q8WTR8 489 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 P3H4Q92791 437 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 GPR137Q96N19 417 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 OMDQ99983 421 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 CBWD1Q9BRT8 395 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 POLDIP3Q9BY77 421 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 SLC2A11Q9BYW1 496 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 TRIM4Q9C037 500 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 OR2B2Q9GZK3 357 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 PRSS22Q9GZN4 317 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 TOLLIPQ9H0E2 274 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 SAV1Q9H4B6 383 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 METTL8Q9H825 291 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 C12orf4Q9NQ89 552 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 PHPT1Q9NRX4 125 aaPredicted RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 MRPL39Q9NYK5 338 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 NARFQ9UHQ1 456 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 C3orf18Q9UK00 162 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 NOCTQ9UK39 431 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 FBXO4Q9UKT5 387 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 ABT1Q9ULW3 272 aaKnown RBP3.78□□□□□ -1.8
VPS41-212ENST00000482217 DHDHQ9UQ10 334 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 URGCP-MRPS24S4R325 110 aa3.78□□□□□ -1.8
VPS41-212ENST00000482217 A0A0A6YYH2 397 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 KIR2DS5A0A0G2JLQ3 304 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CLEC18AA5D8T8 446 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 NEMP2A6NFY4 417 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MGAT4DA6NG13 374 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 A6NJ64 397 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 PCP4L1A6NKN8 68 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 ERI2A8K979 691 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 E5RJQ4 531 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 I6L893 689 aaPredicted RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 KIR2DS3K7RE56 304 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 VCYO14598 125 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LATO43561 262 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 OR10H2O60403 315 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 GMDSO60547 372 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CNOT3O75175 753 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 NEURL1O76050 574 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 LYPLA2O95372 231 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 GAPDHP04406 335 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 WNT1P04628 370 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CELA2AP08217 269 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 UBTFL1P0CB47 393 aaPredicted RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 GIMD1P0DJR0 217 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 CETPP11597 493 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 MSH3P20585 1137 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 PRPS1L1P21108 318 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 YWHABP31946 246 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 CYLC1P35663 651 aaPredicted RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 CFHR2P36980 270 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 FEN1P39748 380 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 TMPOP42166 694 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 MRPL19P49406 292 aaKnown RBP3.77□□□□□ -1.81
VPS41-212ENST00000482217 ERFP50548 548 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 TNFSF10P50591 281 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 HSPA2P54652 639 aa3.77□□□□□ -1.81
VPS41-212ENST00000482217 RPL10AP62906 217 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms