RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZYG11AQ6WRX3 759 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 C9orf106Q8NAJ2 232 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 OR4N2Q8NGD1 307 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 OR14L1PQ8NHC6 308 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 VSTM2LQ96N03 204 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 BTBD9Q96Q07 612 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 GPATCH1Q9BRR8 931 aaKnown RBP16.89■□□□□ 0.29
CLK1-211ENST00000481641 SHCBP1LQ9BZQ2 653 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 SLC24A3Q9HC58 644 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 GIMAP4Q9NUV9 329 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 DNAJB12Q9NXW2 375 aaKnown RBP16.89■□□□□ 0.29
CLK1-211ENST00000481641 FETUBQ9UGM5 382 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 FBXL2Q9UKC9 423 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 OR6C70A6NIJ9 312 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 TSPAN2O60636 221 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 CTAG2O75638 210 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 CBR3O75828 277 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 BCAS2O75934 225 aaPredicted RBP16.88■□□□□ 0.29
CLK1-211ENST00000481641 PROCP04070 461 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 DNAJA1P31689 397 aaKnown RBP16.88■□□□□ 0.29
CLK1-211ENST00000481641 STARP49675 285 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 CEBPEQ15744 281 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 ERCC6LQ2NKX8 1250 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 GALNT18Q6P9A2 607 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 LARP4Q71RC2 724 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLK1-211ENST00000481641 SLC44A2Q8IWA5 706 aaPredicted RBP16.88■□□□□ 0.29
CLK1-211ENST00000481641 TRIM42Q8IWZ5 723 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 FAM9CQ8IZT9 166 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 RNASE6Q93091 150 aaKnown RBP16.88■□□□□ 0.29
CLK1-211ENST00000481641 EFHD2Q96C19 240 aaPredicted RBP16.88■□□□□ 0.29
CLK1-211ENST00000481641 TMCO6Q96DC7 493 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 SLC35A4Q96G79 324 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 BBS4Q96RK4 519 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 TUBA1CQ9BQE3 449 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 OR2B2Q9GZK3 357 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 LIME1Q9H400 295 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 SENP1Q9P0U3 644 aa16.88■□□□□ 0.29
CLK1-211ENST00000481641 POLR3HQ9Y535 204 aaPredicted RBP16.88■□□□□ 0.29
CLK1-211ENST00000481641 SERTM1A2A2V5 107 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 CCDC151A5D8V7 595 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 MBD3L4A6NDZ8 208 aaPredicted RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 MBD3L3A6NE82 208 aaPredicted RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 MBD3L5A6NJ08 208 aaPredicted RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 CD8B2A6NJW9 211 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 SMIM23A6NLE4 172 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 B4DXG7 233 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 GLRA3O75311 464 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 ACTL6AO96019 429 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 JUNP05412 331 aaKnown RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 DDCP20711 480 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 ART1P52961 327 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 IMPG1Q17R60 797 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 SPNS3Q6ZMD2 512 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 PLCZ1Q86YW0 608 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 SAMD14Q8IZD0 417 aaPredicted RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 MBD3L2Q8NHZ7 208 aaPredicted RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 ERP27Q96DN0 273 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 POLDIP3Q9BY77 421 aaKnown RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 CALHM2Q9HA72 323 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 SIRT5Q9NXA8 310 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 ZNF629Q9UEG4 869 aaPredicted RBP16.87■□□□□ 0.29
CLK1-211ENST00000481641 WIF1Q9Y5W5 379 aa16.87■□□□□ 0.29
CLK1-211ENST00000481641 HRNRQ86YZ3 2850 aaPredicted RBP16.86■□□□□ 0.29
CLK1-211ENST00000481641 MYO1GB0I1T2 1018 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 PLOD3O60568 738 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 CYP4B1P13584 511 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 CTSSP25774 331 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 IL12BP29460 328 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 MPIP34949 423 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 NCBP2P52298 156 aaKnown RBP eCLIP16.86■□□□□ 0.291e-7■□□□□ 10.5
CLK1-211ENST00000481641 ZNF763Q0D2J5 394 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 ZNF155Q12901 538 aaPredicted RBP16.86■□□□□ 0.29
CLK1-211ENST00000481641 FOXF2Q12947 444 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 SF3B4Q15427 424 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLK1-211ENST00000481641 SH2D4BQ5SQS7 431 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 FAM71E1Q6IPT2 247 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 FRMD7Q6ZUT3 714 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 ZPLD1Q8TCW7 415 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 UBLCP1Q8WVY7 318 aaPredicted RBP16.86■□□□□ 0.29
CLK1-211ENST00000481641 TAS2R10Q9NYW0 307 aa16.86■□□□□ 0.29
CLK1-211ENST00000481641 PRRC2AP48634 2157 aaKnown RBP16.85■□□□□ 0.29
CLK1-211ENST00000481641 EEF1E1-BLOC1S5C9J1V9 151 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 H0Y3Z8 333 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 EEF1E1O43324 174 aaKnown RBP16.85■□□□□ 0.29
CLK1-211ENST00000481641 PLIN3O60664 434 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 CRCPO75575 148 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 CPN1P15169 458 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 GCKP35557 465 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 KRT20P35900 424 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 MC3RP41968 323 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 IST1P53990 364 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 GAS1P54826 345 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 GFRA1P56159 465 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 PSG6Q00889 435 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 EFR3AQ14156 821 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 RCAN2Q14206 197 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 FBXL19-AS1Q494R0 122 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 FLYWCH1Q4VC44 716 aa16.85■□□□□ 0.29
CLK1-211ENST00000481641 TMEM107Q6UX40 140 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms