RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 OR56A3Q8NH54 315 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ABCG5Q9H222 651 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 EPHX3Q9H6B9 360 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 MTHFD2LQ9H903 347 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PCDHGB6Q9Y5F9 930 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 MT-ND5P03915 603 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GNSP15586 552 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 HOXA9P31269 272 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GGT2P36268 569 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 MAN2A2P49641 1150 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 CXCR4P61073 352 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 C11orf91Q3C1V1 193 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SAMD12Q8N8I0 201 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 OR5D16Q8NGK9 328 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 NEIL3Q8TAT5 605 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PTCHD1Q96NR3 888 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SLC35F4A4IF30 521 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 H3BNC9 293 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 DBIP07108 87 aaKnown RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ITGAMP11215 1152 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 NDUFV2P19404 249 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 CBX5P45973 191 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 RNF144AP50876 292 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ARHGAP40Q5TG30 622 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF691Q5VV52 312 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 QSOX2Q6ZRP7 698 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 METTL27Q8N6F8 245 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 RFT1Q96AA3 541 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ZFYVE21Q9BQ24 234 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 RANBP3Q9H6Z4 567 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 TAS2R10Q9NYW0 307 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 UBQLN2Q9UHD9 624 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SCGNO76038 276 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 KCNK5O95279 499 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 LDOC1O95751 146 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 CSTAP01040 98 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 IRS1P35568 1242 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 MC3RP41968 323 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ARRB1P49407 418 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SNRPD2P62316 118 aaKnown RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PPP3R1P63098 170 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 SHC2P98077 582 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 NNATQ16517 81 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ZCCHC12Q6PEW1 402 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 GPALPP1Q8IXQ4 340 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 OR5K2Q8NHB8 316 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 BCL7BQ9BQE9 202 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-206ENST00000479501 PRODH2Q9UF12 536 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF639Q9UID6 485 aa13.56□□□□□ -0.24
COL20A1-206ENST00000479501 A0A1B0GTL3 188 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 ITGA10O75578 1167 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 TSPAN12O95859 305 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 AK1P00568 194 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 GADD45AP24522 165 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 EDNRAP25101 427 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 GNALP38405 381 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 GPR4P46093 362 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 PSMA6P60900 246 aaKnown RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 RAB12Q6IQ22 244 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 PAQR7Q86WK9 346 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 SPERTQ8NA61 448 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 SHDQ96IW2 340 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 UHRF1Q96T88 793 aaPredicted RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 TIMM29Q9BSF4 260 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 TRPV4Q9HBA0 871 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 PRSS16Q9NQE7 514 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 ASIC5Q9NY37 505 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 OR6C2Q9NZP2 312 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 FXYD1O00168 92 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 SOX30O94993 753 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 AK4P27144 223 aaPredicted RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 SOX9P48436 509 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 EMX1Q04741 257 aaPredicted RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 Q6ZNB5 142 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 ZNF683Q8IZ20 524 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 TMEM151AQ8N4L1 468 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 ZFP90Q8TF47 636 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 C15orf40Q8WUR7 153 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 HCN3Q9P1Z3 774 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 NLKQ9UBE8 527 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 RBM7Q9Y580 266 aaKnown RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 TMEM202A6NGA9 273 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 ARAFP10398 606 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 PTGER1P34995 402 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 FNTBP49356 437 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 C22orf42Q6IC83 251 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 FRMPD2BQ6IN97 320 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 EIF5AL1Q6IS14 154 aaKnown RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 IQCF1Q8N6M8 205 aa13.55□□□□□ -0.24
COL20A1-206ENST00000479501 ADAD1Q96M93 576 aaKnown RBP13.55□□□□□ -0.24
COL20A1-206ENST00000479501 SERTAD3Q9UJW9 196 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms