RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NAGLUP54802 743 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 MRPS35P82673 323 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF763Q0D2J5 394 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 GAB1Q13480 694 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 DAZAP2Q15038 168 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNHIT3Q15649 155 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 LTB4RQ15722 352 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 IMPG1Q17R60 797 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF628Q5EBL2 1059 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 GALNT18Q6P9A2 607 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 CHMP1BQ7LBR1 199 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 WNT2BQ93097 391 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 TMBIM1Q969X1 311 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 EXOSC8Q96B26 276 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 L3HYPDHQ96EM0 354 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF681Q96N22 645 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 SFXN2Q96NB2 322 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 NODALQ96S42 347 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 YIPF4Q9BSR8 244 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 ACPTQ9BZG2 426 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 IQCGQ9H095 443 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 PIGMQ9H3S5 423 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 GALNT9Q9HCQ5 603 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 SLC35C2Q9NQQ7 365 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 DCDC2Q9UHG0 476 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 ST6GALNAC2Q9UJ37 374 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 WBP11Q9Y2W2 641 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 CSMD2Q7Z408 3487 aa13.16□□□□□ -0.3
SMARCE1-209ENST00000478349 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 C2CD3Q4AC94 2353 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 A0A1B0GTL3 188 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 PPP6CO00743 305 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 DLX3O60479 287 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 PLOD3O60568 738 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 ANXA4P09525 319 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 SBK3P0C264 359 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 EPXP11678 715 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 CLK3P49761 638 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 PNLIPRP2P54317 469 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 PSMD4P55036 377 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 HMGCS1Q01581 520 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF155Q12901 538 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 UNC50Q53HI1 259 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 CCDC116Q8IYX3 515 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 MMP21Q8N119 569 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 OR4K17Q8NGC6 315 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 OR9A2Q8NGT5 310 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 ALPK1Q96QP1 1244 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 PPCSQ9HAB8 311 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 TMEM216Q9P0N5 145 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 ZNF225Q9UK10 706 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 GRID1Q9ULK0 1009 aa13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 MRPS18CQ9Y3D5 142 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-209ENST00000478349 SERTM1A2A2V5 107 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 TTC36A6NLP5 189 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 LINC01387J3KSC0 135 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 RIPK2O43353 540 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 GLRA3O75311 464 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 MYL2P10916 166 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CD99P14209 185 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 DDCP20711 480 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 WNT3P56703 355 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 EEFSECP57772 596 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 GANABQ14697 944 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CFAP157Q5JU67 520 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 TCHHL1Q5QJ38 904 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 DCST1Q5T197 706 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 IKBIPQ70UQ0 350 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 GRAMD2AQ8IUY3 354 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 TRIM42Q8IWZ5 723 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CCNYL1Q8N7R7 359 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CDC26Q8NHZ8 85 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 C16orf78Q8WTQ4 265 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 VSTM2LQ96N03 204 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 UCN2Q96RP3 112 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 RBM24Q9BX46 236 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CXXC4Q9H2H0 198 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 PTGES2Q9H7Z7 377 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 FOLH1BQ9HBA9 442 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 C3orf14Q9HBI5 128 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 Q9N2J8 555 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 MID1IP1Q9NPA3 183 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 RRAGDQ9NQL2 400 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CCM2LQ9NUG4 571 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 DDX18Q9NVP1 670 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 SIRT5Q9NXA8 310 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 HEY2Q9UBP5 337 aa13.14□□□□□ -0.31
SMARCE1-209ENST00000478349 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms