RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PDGFRLQ15198 375 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 INAQ16352 499 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SLC5A12Q1EHB4 618 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TIMM50Q3ZCQ8 353 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 COLEC12Q5KU26 742 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 FAM46CQ5VWP2 391 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CEACAM20Q6UY09 585 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 FAM83HQ6ZRV2 1179 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SLC46A3Q7Z3Q1 461 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 C11orf96Q7Z7L8 435 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZBTB46Q86UZ6 589 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 NUDT13Q86X67 352 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 LACC1Q8IV20 430 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CCDC103Q8IW40 242 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 STX19Q8N4C7 294 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ARHGEF39Q8N4T4 335 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 LINC00471Q8N535 108 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 AMER2Q8N7J2 671 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 AQP11Q8NBQ7 271 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM145Q8NBT3 493 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 FAM46DQ8NEK8 389 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TTLQ8NG68 377 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OR9Q2Q8NGE9 314 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OR5AR1Q8NGP9 310 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OR5AK3PQ8NH89 298 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OR5K2Q8NHB8 316 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MCFD2Q8NI22 146 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PSMA8Q8TAA3 256 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PHOSPHO2Q8TCD6 241 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF675Q8TD23 568 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 UTP15Q8TED0 518 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SUSD6Q92537 303 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TFGQ92734 400 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PROX1Q92786 737 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RGMAQ96B86 450 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF707Q96C28 371 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TM4SF18Q96CE8 201 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZBED6CLQ96FA7 236 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 Q96MT0 163 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 DACH2Q96NX9 599 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 IL17FQ96PD4 163 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TEFMQ96QE5 360 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF607Q96SK3 696 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RHNO1Q9BSD3 238 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 BTBD2Q9BX70 525 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SLIRPQ9GZT3 109 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RACGAP1Q9H0H5 632 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CXorf36Q9H7Y0 433 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ACSS1Q9NUB1 689 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ACER3Q9NUN7 267 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM184CQ9NVA4 438 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RLIMQ9NVW2 624 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 IRAK4Q9NWZ3 460 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CHCHD3Q9NX63 227 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CLDND1Q9NY35 253 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OBP2AQ9NY56 170 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CCDC59Q9P031 241 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 FTSJ1Q9UET6 329 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TAC3Q9UHF0 121 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 KCND3Q9UK17 655 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RAB23Q9ULC3 237 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ACSL5Q9ULC5 683 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MGAT4BQ9UQ53 548 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 KLK4Q9Y5K2 254 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 HCFC2Q9Y5Z7 792 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PMF1-BGLAPU3KQ54 211 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 DSPPQ9NZW4 1301 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 DOPEY1Q5JWR5 2465 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MYO7AQ13402 2215 aa4.65□□□□□ -1.66
SF3B6-202ENST00000478050 DOCK8Q8NF50 2099 aa4.65□□□□□ -1.66
SF3B6-202ENST00000478050 PRAMEF25A6NGN4 478 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 HEPACAM2A8MVW5 462 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 C5orf67F2Z3F1 127 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 J3KTA2 159 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 TOR1BO14657 336 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PCDH17O14917 1159 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 KMOO15229 486 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MBTPS2O43462 519 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SH3BP5O60239 455 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 KCNJ13O60928 360 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 GUCY1B2O75343 617 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SERPINB7O75635 380 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 MFN2O95140 757 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PCCBP05166 539 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 BCHEP06276 602 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 H1F0P07305 194 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 STSP08842 583 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SLC35G4P0C7Q5 338 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 ADORA3P0DMS8 318 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 OSMP13725 252 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 GADD45AP24522 165 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 C21orf33P30042 268 aaPredicted RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 PPP2R1BP30154 601 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 S100A5P33763 92 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 LIPAP38571 399 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 EIF2DP41214 584 aaKnown RBP4.65□□□□□ -1.67
SF3B6-202ENST00000478050 P2RY2P41231 377 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 SLC6A11P48066 632 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 KCNJ5P48544 419 aa4.65□□□□□ -1.67
SF3B6-202ENST00000478050 GSSP48637 474 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms