RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SMAD9O15198 467 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 SEC14L5O43304 696 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 FCGR2AP12318 317 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 S1PR1P21453 382 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 GABRB3P28472 473 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 TLX1P31314 330 aaPredicted RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 CASP2P42575 452 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 PGGT1BP53609 377 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 GAS1P54826 345 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 CDH11P55287 796 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 CTBP2P56545 445 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 DSCR4P56555 118 aaPredicted RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 TNFRSF17Q02223 184 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 P2RY6Q15077 328 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 AP5B1Q2VPB7 878 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 C18orf21Q32NC0 220 aaPredicted RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 SFRP5Q5T4F7 317 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 MFSD12Q6NUT3 480 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 PEG10Q86TG7 708 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 STK32CQ86UX6 486 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 LMNTD2Q8IXW0 634 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF619Q8N2I2 560 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 MUC15Q8N387 334 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 LRRC57Q8N9N7 239 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 SNX31Q8N9S9 440 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF473Q8WTR7 871 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 RNF138Q8WVD3 245 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 C3orf49Q96BT1 292 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 OMA1Q96E52 524 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 WDR34Q96EX3 536 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 PDLIM5Q96HC4 596 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 FOXN4Q96NZ1 517 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 DHRS9Q9BPW9 319 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 SORBS1Q9BX66 1292 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 MS4A8Q9BY19 250 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 EHD1Q9H4M9 534 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 FOLH1BQ9HBA9 442 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 FBXO34Q9NWN3 711 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 IFNKQ9P0W0 207 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 ASIC3Q9UHC3 531 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
SPTLC1-205ENST00000477888 CADP27708 2225 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 MAGEB16A2A368 324 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 A6NJY4 79 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 EFCAB8A8MWE9 144 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 TRIM77I1YAP6 450 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 LINC01387J3KSC0 135 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 ABCD4O14678 606 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 WDR47O94967 919 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 PLGP00747 810 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF23P17027 643 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 CD22P20273 847 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 HNMTP50135 292 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 ARFIP2P53365 341 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 HNRNPH2P55795 449 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 HILS1P60008 231 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 RPS3AP61247 264 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 BASP1P80723 227 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 CDKL1Q00532 357 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 CDK16Q00536 496 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 LGALS3BPQ08380 585 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 NNATQ16517 81 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 TMEM35AQ53FP2 167 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 RBM20Q5T481 1227 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 DEPDC1Q5TB30 811 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 OR4C11Q6IEV9 310 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 USP43Q70EL4 1123 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 LUZP1Q86V48 1076 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 GALNT12Q8IXK2 581 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 GBP7Q8N8V2 638 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 CCDC89Q8N998 374 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 OR7G1Q8NGA0 311 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 C1orf54Q8WWF1 131 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 GFM2Q969S9 779 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 ZNF669Q96BR6 464 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 RADILQ96JH8 1075 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 SERPINB12Q96P63 405 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 RBM4Q9BWF3 364 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 CAPS2Q9BXY5 557 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 FRMD8P1Q9BZ68 369 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 STMN4Q9H169 189 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 METTL17Q9H7H0 456 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 GLRX2Q9NS18 164 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 GPRC5BQ9NZH0 403 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 EHD3Q9NZN3 535 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 XPR1Q9UBH6 696 aa6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 EPN1Q9Y6I3 576 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.49□□□□□ -1.37
SPTLC1-205ENST00000477888 LOC390937A0A1W2PQ73 354 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 A0A1W2PR48 441 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 OR2M5A3KFT3 312 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 OR6C70A6NIJ9 312 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 GLOD5A6NK44 160 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 C17orf51A8MQB3 221 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 SAP18O00422 153 aaKnown RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 EIF1AYO14602 144 aaKnown RBP6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 TO15178 435 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 ACOX3O15254 700 aa6.48□□□□□ -1.37
SPTLC1-205ENST00000477888 MFAP3LO75121 409 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms