RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MAP4K2Q12851 820 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 OR5M10Q6IEU7 315 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 FAM111BQ6SJ93 734 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 STAC2Q6ZMT1 411 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 DNM1P46Q6ZS02 220 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 FBXO36Q8NEA4 188 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 ADCY4Q8NFM4 1077 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 STAG3L4Q8TBR4 150 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 RNF138Q8WVD3 245 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 TMBIM1Q969X1 311 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 GPR22Q99680 433 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 BRINP2Q9C0B6 783 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 SLCO5A1Q9H2Y9 848 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 SMYD2Q9NRG4 433 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 GOLGA6L10A6NI86 522 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 H0YC42 278 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 UBXN8O00124 270 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 HAX1O00165 279 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 PIAS1O75925 651 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 THBS1P07996 1170 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 FCGR2AP12318 317 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 ACVR1BP36896 505 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 SUCLG1P53597 346 aaKnown RBP18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 TPD52P55327 224 aaPredicted RBP18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 DSCR4P56555 118 aaPredicted RBP18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 OCRLQ01968 901 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 FASTKD3Q14CZ7 662 aaKnown RBP18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 PON3Q15166 354 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 ADAM5Q6NVV9 412 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 TEX9Q8N6V9 391 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 ACTRT1Q8TDG2 376 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 ATOH8Q96SQ7 321 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 DDX47Q9H0S4 455 aaKnown RBP18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 PRODH2Q9UF12 536 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 CDC42EP3Q9UKI2 254 aa18.19■□□□□ 0.5
PDLIM1-202ENST00000477757 FOXE1O00358 373 aaPredicted RBP18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 UGDHO60701 494 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 KERAO60938 352 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 ALDOAP04075 364 aaKnown RBP18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 SOD3P08294 240 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 NEK2P51955 445 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 GAS1P54826 345 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 RAB10P61026 200 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 ISCA2Q86U28 154 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 WFDC8Q8IUA0 241 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 OR4K17Q8NGC6 315 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 OR52R1Q8NGF1 315 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 WDR20Q8TBZ3 569 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 BTBD9Q96Q07 612 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 GPR55Q9Y2T6 319 aaPredicted RBP18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 JRKLQ9Y4A0 524 aa18.18■□□□□ 0.5
PDLIM1-202ENST00000477757 SEC14L5O43304 696 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 REM1O75628 298 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 IGHV4-39P01824 125 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 DANCRP0C864 163 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 EMDP50402 254 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 GPX6P59796 221 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 EFR3AQ14156 821 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 CPSF6Q16630 551 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 C6orf52Q5T4I8 152 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 RAET1LQ5VY80 246 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 SLC48A1Q6P1K1 146 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 FADS6Q8N9I5 356 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 OR6K3Q8NGY3 331 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 FBXW5Q969U6 566 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 GTPBP3Q969Y2 492 aaKnown RBP18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 ADOQ96SZ5 270 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 RBBP8Q99708 897 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 AMBRA1Q9C0C7 1298 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 ACTR6Q9GZN1 396 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 PLSCR4Q9NRQ2 329 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 CES1P1Q9UKY3 287 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 EMC9Q9Y3B6 208 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 ANGPTL3Q9Y5C1 460 aa18.17■□□□□ 0.5
PDLIM1-202ENST00000477757 C17orf51A8MQB3 221 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 LINC01387J3KSC0 135 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 TSPAN2O60636 221 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 CDKN1AP38936 164 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 CLDN20P56880 219 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 PDIA2Q13087 525 aaKnown RBP18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 METTL25Q8N6Q8 603 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 LILRB1Q8NHL6 650 aaPredicted RBP18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 RAB3IL1Q8TBN0 382 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 OR10A4Q9H209 315 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 ADAM29Q9UKF5 820 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 ZNF337Q9Y3M9 751 aa18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 MAGED1Q9Y5V3 778 aaPredicted RBP18.16■□□□□ 0.5
PDLIM1-202ENST00000477757 E7ESA3 106 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 ADAM11O75078 769 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 AQP8O94778 261 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 MTHFD2P13995 350 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 PCSK2P16519 638 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 CSNK2A2P19784 350 aaPredicted RBP18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 FEN1P39748 380 aaKnown RBP18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 ZNF844Q08AG5 666 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 DLG1Q12959 904 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 GANABQ14697 944 aaKnown RBP18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 L3MBTL4Q8NA19 623 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms