RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 DOHHQ9BU89 302 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 NUF2Q9BZD4 464 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 AKTIPQ9H8T0 292 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 MEAF6Q9HAF1 191 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 ACSS1Q9NUB1 689 aaPredicted RBP12.92□□□□□ -0.34
SRRT-210ENST00000477529 DDX18Q9NVP1 670 aaKnown RBP12.92□□□□□ -0.34
SRRT-210ENST00000477529 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
SRRT-210ENST00000477529 TINAGQ9UJW2 476 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 BOKQ9UMX3 212 aaPredicted RBP12.92□□□□□ -0.34
SRRT-210ENST00000477529 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
SRRT-210ENST00000477529 ANKHD1Q8IWZ3 2542 aaKnown RBP12.92□□□□□ -0.34
SRRT-210ENST00000477529 A0A1B0GUH1 482 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 OR6C70A6NIJ9 312 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 TSPAN2O60636 221 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
SRRT-210ENST00000477529 CELA3AP09093 270 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 RFPL3SP0C7P2 107 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 LAMP1P11279 417 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 G6PDP11413 515 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 NAGAP17050 411 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 RPL3P39023 403 aaKnown RBP12.91□□□□□ -0.34
SRRT-210ENST00000477529 DIO3P55073 304 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 C21orf58P58505 322 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 OCRLQ01968 901 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 EMX2Q04743 252 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 MAD2L1Q13257 205 aaPredicted RBP12.91□□□□□ -0.34
SRRT-210ENST00000477529 C3AR1Q16581 482 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.91□□□□□ -0.34
SRRT-210ENST00000477529 FNDC7Q5VTL7 733 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 TMEM81Q6P7N7 255 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 RGS9BPQ6ZS82 235 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 HDXQ7Z353 690 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 WDR53Q7Z5U6 358 aaPredicted RBP12.91□□□□□ -0.34
SRRT-210ENST00000477529 SPPL2CQ8IUH8 684 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 OR4N2Q8NGD1 307 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 RELTQ969Z4 430 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 SLC35A4Q96G79 324 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 RILPQ96NA2 401 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 NODALQ96S42 347 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 MANSC1Q9H8J5 431 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 VIPAS39Q9H9C1 493 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
SRRT-210ENST00000477529 SH3BGRL2Q9UJC5 107 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 EIF3LQ9Y262 564 aaKnown RBP12.91□□□□□ -0.34
SRRT-210ENST00000477529 APCP25054 2843 aa12.91□□□□□ -0.34
SRRT-210ENST00000477529 TACC2O95359 2948 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 TRGV8A0A0C4DH27 118 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 A0A1B0GTH9 108 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 SDHDO14521 159 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 IGHG3P01860 377 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 ABOP16442 354 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 PRPS1L1P21108 318 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 GPC1P35052 558 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 PTGDSP41222 190 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 CASP3P42574 277 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 PSPHP78330 225 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 MLC1Q15049 377 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 NUP54Q7Z3B4 507 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 SLC44A2Q8IWA5 706 aaPredicted RBP12.9□□□□□ -0.34
SRRT-210ENST00000477529 LRRC34Q8IZ02 419 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
SRRT-210ENST00000477529 GIMAP5Q96F15 307 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 LMF2Q9BU23 707 aaKnown RBP12.9□□□□□ -0.34
SRRT-210ENST00000477529 ANGPTL4Q9BY76 406 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 ZFP64Q9NPA5 681 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
SRRT-210ENST00000477529 NTMQ9P121 344 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 HRH3Q9Y5N1 445 aa12.9□□□□□ -0.34
SRRT-210ENST00000477529 LRBAP50851 2863 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 HRNRQ86YZ3 2850 aaPredicted RBP12.89□□□□□ -0.35
SRRT-210ENST00000477529 KLF11O14901 512 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 ZG16O60844 167 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 SASH3O75995 380 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 PDE9AO76083 593 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 ALDOCP09972 364 aaKnown RBP12.89□□□□□ -0.35
SRRT-210ENST00000477529 DDX5P17844 614 aaKnown RBP12.89□□□□□ -0.35
SRRT-210ENST00000477529 MAP3K8P41279 467 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 MANFP55145 182 aaKnown RBP12.89□□□□□ -0.35
SRRT-210ENST00000477529 CLDN8P56748 225 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 RPP38P78345 283 aaKnown RBP12.89□□□□□ -0.35
SRRT-210ENST00000477529 CPTPQ5TA50 214 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 ATG16L1Q676U5 607 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 OGFOD2Q6N063 350 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 ARHGAP11AQ6P4F7 1023 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 LARP4Q71RC2 724 aaKnown RBP eCLIP12.89□□□□□ -0.359e-14■■■■■ 49.8
SRRT-210ENST00000477529 CAMKMTQ7Z624 323 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 PSMA8Q8TAA3 256 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 EFHD2Q96C19 240 aaPredicted RBP12.89□□□□□ -0.35
SRRT-210ENST00000477529 COQ8BQ96D53 544 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 TMEM41AQ96HV5 264 aa12.89□□□□□ -0.35
SRRT-210ENST00000477529 JSRP1Q96MG2 331 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms