RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ISCA2Q86U28 154 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 MYLK4Q86YV6 388 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 TEX9Q8N6V9 391 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 FNDC9Q8TBE3 224 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 AKAP1Q92667 903 aaKnown RBP eCLIP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 TMBIM1Q969X1 311 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 TMCO6Q96DC7 493 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 DTNBP1Q96EV8 351 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 TSPAN17Q96FV3 270 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 COL21A1Q96P44 957 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 PINK1Q9BXM7 581 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 ALG9Q9H6U8 611 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 NSMCE4AQ9NXX6 385 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 NUDT4Q9NZJ9 180 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 MAT2BQ9NZL9 334 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 BCAP29Q9UHQ4 241 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF639Q9UID6 485 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 PLLPQ9Y342 182 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF175Q9Y473 711 aa10.22□□□□□ -0.77
BRCA1-213ENST00000476777 YLPM1P49750 1951 aaKnown RBP10.22□□□□□ -0.77
BRCA1-213ENST00000476777 GOLGA6L10A0A0M3HER8 536 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 C17orf51A8MQB3 221 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 UBXN8O00124 270 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ATP1B1P05026 303 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 THBS1P07996 1170 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 SOD3P08294 240 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 GRK2P25098 689 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 CDC25BP30305 580 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ACVR1BP36896 505 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 PPICP45877 212 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 NEK2P51955 445 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 GAS1P54826 345 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ARL4CP56559 192 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 EEFSECP57772 596 aaKnown RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 PHEXP78562 749 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 OCRLQ01968 901 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ILF2Q12905 390 aaKnown RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 PON3Q15166 354 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ZKSCAN8Q15776 578 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 STAC2Q6ZMT1 411 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 GBP7Q8N8V2 638 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 FBXO36Q8NEA4 188 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ADCY4Q8NFM4 1077 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 OR52R1Q8NGF1 315 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 LILRB1Q8NHL6 650 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 STAG3L4Q8TBR4 150 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 WDR20Q8TBZ3 569 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 RNF138Q8WVD3 245 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 TRMT61AQ96FX7 289 aaKnown RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 SLC35A4Q96G79 324 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 ATOH8Q96SQ7 321 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 BRINP2Q9C0B6 783 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 DDX47Q9H0S4 455 aaKnown RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 SLCO5A1Q9H2Y9 848 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 CES1P1Q9UKY3 287 aa10.21□□□□□ -0.77
BRCA1-213ENST00000476777 GPR55Q9Y2T6 319 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-213ENST00000476777 SUPT3HB4E1H0 165 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 FOXE1O00358 373 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-213ENST00000476777 TP73O15350 636 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 SEC14L5O43304 696 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 KERAO60938 352 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 ADAM11O75078 769 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 SUPT3HO75486 399 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 REM1O75628 298 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 AQP8O94778 261 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 SEMA3DO95025 777 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 IGHV4-39P01824 125 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 DANCRP0C864 163 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 STMN1P16949 149 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 FEN1P39748 380 aaKnown RBP10.2□□□□□ -0.78
BRCA1-213ENST00000476777 EMDP50402 254 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 DSCR4P56555 118 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-213ENST00000476777 DLG1Q12959 904 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 CPSF6Q16630 551 aaKnown RBP eCLIP10.2□□□□□ -0.78
BRCA1-213ENST00000476777 TRMT12Q53H54 448 aaKnown RBP10.2□□□□□ -0.78
BRCA1-213ENST00000476777 ADAM5Q6NVV9 412 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 FAM214BQ7L5A3 538 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 WFDC8Q8IUA0 241 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 RAB3IL1Q8TBN0 382 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 ACTRT1Q8TDG2 376 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 ADOQ96SZ5 270 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 GPR22Q99680 433 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 LRRC1Q9BTT6 524 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 PLSCR4Q9NRQ2 329 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 PRODH2Q9UF12 536 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 CDC42EP3Q9UKI2 254 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 ZNF337Q9Y3M9 751 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 JRKLQ9Y4A0 524 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 MEGF8Q7Z7M0 2845 aa10.2□□□□□ -0.78
BRCA1-213ENST00000476777 CXorf49A8MYA2 514 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-213ENST00000476777 E7ESA3 106 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 GPRIN2O60269 458 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 TSPAN2O60636 221 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 UGDHO60701 494 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 KLK1P06870 262 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 MTHFD2P13995 350 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 CDKN1AP38936 164 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 CLDN20P56880 219 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 GPX6P59796 221 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 RAB10P61026 200 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms