RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 MAN2A2P49641 1150 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 SMSP52788 366 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 SLC18A1P54219 525 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 ABCE1P61221 599 aaKnown RBP12.56□□□□□ -0.4
MSL3-213ENST00000476743 CHI3L2Q15782 390 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 GALNTL6Q49A17 601 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 GXYLT1Q4G148 440 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 ATP6AP1LQ52LC2 224 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 DESI1Q6ICB0 168 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 ANKRD26P1Q6NSI1 321 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 SLC30A6Q6NXT4 461 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 TMEM107Q6UX40 140 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 MARVELD2Q8N4S9 558 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 HOXB13Q92826 284 aaPredicted RBP12.56□□□□□ -0.4
MSL3-213ENST00000476743 GFM2Q969S9 779 aaKnown RBP12.56□□□□□ -0.4
MSL3-213ENST00000476743 TMBIM1Q969X1 311 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 PPCDCQ96CD2 204 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 COL21A1Q96P44 957 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 SORT1Q99523 831 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 LMF2Q9BU23 707 aaKnown RBP12.56□□□□□ -0.4
MSL3-213ENST00000476743 C20orf27Q9GZN8 174 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 CENPHQ9H3R5 247 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 ZNF395Q9H8N7 513 aaPredicted RBP12.56□□□□□ -0.4
MSL3-213ENST00000476743 GIMAP2Q9UG22 337 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 BAIAP2L1Q9UHR4 511 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 ATP6V1HQ9UI12 483 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 C15orf41Q9Y2V0 281 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 CACNA1CQ13936 2221 aa12.56□□□□□ -0.4
MSL3-213ENST00000476743 ADGRG4Q8IZF6 3080 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 TRGV5A0A0B4J1U4 118 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 WDR91A4D1P6 747 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 TTC36A6NLP5 189 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 NPIPA2E9PIF3 369 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 NPIPA3F8WFD2 350 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 AKAP10O43572 662 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 ICOSLGO75144 302 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PEX11AO75192 247 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 SKAP2O75563 359 aaPredicted RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 HSPA4LO95757 839 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PRPS2P11908 318 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 COL8A1P27658 744 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PTPN6P29350 595 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 RPL3P39023 403 aaKnown RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 DCTP40126 519 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 MAP3K8P41279 467 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 EFR3AQ14156 821 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 MLC1Q15049 377 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 SMU1Q2TAY7 513 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 CYP27C1Q4G0S4 372 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 TIGD3Q6B0B8 471 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 C3P1Q6ZMU1 363 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 NCCRP1Q6ZVX7 275 aaPredicted RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 ZNF551Q7Z340 670 aaPredicted RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 R3HCC1LQ7Z5L2 792 aaKnown RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 KIRREL3Q8IZU9 778 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 ZNF781Q8N8C0 355 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 CLHC1Q8NHS4 586 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 ZFP28Q8NHY6 868 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PPP1R14CQ8TAE6 165 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 NEIL3Q8TAT5 605 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 CIDECQ96AQ7 238 aaPredicted RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 SARAFQ96BY9 339 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 TLCD1Q96CP7 247 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 TMCO6Q96DC7 493 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 ZBED6CLQ96FA7 236 aaPredicted RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 OSBPL11Q9BXB4 747 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 METTL7AQ9H8H3 244 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PNPLA3Q9NST1 481 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 DDX18Q9NVP1 670 aaKnown RBP12.55□□□□□ -0.4
MSL3-213ENST00000476743 ASIC5Q9NY37 505 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 SPRR3Q9UBC9 169 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 RAP2CQ9Y3L5 183 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PCDHGB3Q9Y5G1 929 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 ITPR2Q14571 2701 aa12.55□□□□□ -0.4
MSL3-213ENST00000476743 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 SNPHO15079 494 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 SCAMP2O15127 329 aaKnown RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 REM1O75628 298 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 DDX5P17844 614 aaKnown RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 BGNP21810 368 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 GDF1P27539 372 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 SLC1A6P48664 564 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 CDK9P50750 372 aaKnown RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 C21orf58P58505 322 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 ZNF155Q12901 538 aaPredicted RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 CDSNQ15517 529 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 ZNF630Q2M218 657 aaPredicted RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 SLC44A2Q8IWA5 706 aaPredicted RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 RIMKLAQ8IXN7 391 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 LIX1Q8N485 282 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 FNDC5Q8NAU1 212 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 JSRP1Q96MG2 331 aaPredicted RBP12.54□□□□□ -0.4
MSL3-213ENST00000476743 GNRHR2Q96P88 292 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 SLC6A15Q9H2J7 730 aa12.54□□□□□ -0.4
MSL3-213ENST00000476743 LDAHQ9H6V9 325 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms