RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SHISA9B4DS77 424 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 NPIPA2E9PIF3 369 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 NOL3O60936 208 aaKnown RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 VENTXO95231 258 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 HSPA5P11021 654 aaKnown RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 MFAP2P55001 183 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 NOP14P78316 857 aaKnown RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 FCHO2Q0JRZ9 810 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 ELP6Q0PNE2 266 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 RAPSNQ13702 412 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 TFDP1Q14186 410 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 TRIP10Q15642 601 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 TMEM44Q2T9K0 475 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 C14orf28Q4W4Y0 310 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 LEMD1Q68G75 181 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 REP15Q6BDI9 236 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 PRR5LQ6MZQ0 368 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 SLC25A24Q6NUK1 477 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 CBLN3Q6UW01 205 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 METTL7BQ6UX53 244 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 GSG1LQ6UXU4 331 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 APOOLQ6UXV4 268 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 ZNF841Q6ZN19 808 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 ARMCX2Q7L311 632 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 LRRC49Q8IUZ0 686 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 FADS6Q8N9I5 356 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 ZNF540Q8NDQ6 660 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 GIPC3Q8TF64 312 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 GPA33Q99795 319 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 ZNF416Q9BWM5 594 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 RNF41Q9H4P4 317 aaPredicted RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 GPN2Q9H9Y4 310 aaPredicted RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 DCAF13Q9NV06 445 aaKnown RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 GHRLQ9UBU3 117 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 MRPL11Q9Y3B7 192 aaKnown RBP4.72□□□□□ -1.65
VPS50-212ENST00000476413 STYXL1Q9Y6J8 313 aa4.72□□□□□ -1.65
VPS50-212ENST00000476413 METP08581 1390 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 MFSD2BA6NFX1 497 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 LRRC30A6NM36 301 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 WASHC1A8K0Z3 465 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 WASH3PC4AMC7 463 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 ANGPT2O15123 496 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 HOXD4P09016 255 aaPredicted RBP4.71□□□□□ -1.66
VPS50-212ENST00000476413 CALCBP10092 127 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 THRBP10828 461 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 AXLP30530 894 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 SLC7A2P52569 658 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 OVGP1Q12889 678 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 ZNF506Q5JVG8 444 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 BEND6Q5SZJ8 279 aaPredicted RBP4.71□□□□□ -1.66
VPS50-212ENST00000476413 WASH2PQ6VEQ5 465 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 EFCAB13Q8IY85 973 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 OR52J3Q8NH60 311 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 FNDC8Q8TC99 324 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 CRYGNQ8WXF5 182 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 RAB7BQ96AH8 199 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 PINX1Q96BK5 328 aaKnown RBP4.71□□□□□ -1.66
VPS50-212ENST00000476413 CASD1Q96PB1 797 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 RPP25Q9BUL9 199 aaKnown RBP4.71□□□□□ -1.66
VPS50-212ENST00000476413 CARD6Q9BX69 1037 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 ELL3Q9HB65 397 aaPredicted RBP4.71□□□□□ -1.66
VPS50-212ENST00000476413 KLRF1Q9NZS2 232 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 PAK5Q9P286 719 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 DHRS7Q9Y394 339 aa4.71□□□□□ -1.66
VPS50-212ENST00000476413 IGHV3OR16-12A0A075B7B8 117 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 IGKV3D-15A0A087WSY6 115 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 A0A1B0GTH9 108 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TM9SF1O15321 606 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TYROBPO43914 113 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 MBD3O95983 291 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 IGHV3-13P01766 116 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 KRT8P05787 483 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TSPY4P0CV99 314 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TSPY10P0CW01 314 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 KRT13P13646 458 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 IGFBP5P24593 272 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 PPP2R1BP30154 601 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 GSTO1P78417 241 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 BNIP1Q12981 228 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 DCAF4L1Q3SXM0 396 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 ASPHD2Q6ICH7 369 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 LRRC8BQ6P9F7 803 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 ABRAXAS1Q6UWZ7 409 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TMEM184AQ6ZMB5 413 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 Q7L0L9 218 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 STKLD1Q8NE28 680 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 IPMKQ8NFU5 416 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 DNAJA3Q96EY1 480 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 C4orf36Q96KX1 117 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 VPS35Q96QK1 796 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TBCDQ9BTW9 1192 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 TBC1D10AQ9BXI6 508 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 WDR76Q9H967 626 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 LPAR2Q9HBW0 351 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 ABCC13Q9NSE7 274 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 DUS2Q9NX74 493 aaKnown RBP4.7□□□□□ -1.66
VPS50-212ENST00000476413 TMOD2Q9NZR1 351 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 CHRNA9Q9UGM1 479 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 LAMP5Q9UJQ1 280 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms