RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 EID3Q8N140 333 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 OR2L13Q8N349 312 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 ELP4Q96EB1 424 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 ZNF764Q96H86 408 aaPredicted RBP19.36■□□□□ 0.69
LIME1-204ENST00000476183 TMEM41AQ96HV5 264 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 REEP4Q9H6H4 257 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 METTL7AQ9H8H3 244 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 GALNT9Q9HCQ5 603 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 TAS2R9Q9NYW1 312 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 B4GALT7Q9UBV7 327 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 PKDREJQ9NTG1 2253 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 ADGRG4Q8IZF6 3080 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 MED12Q93074 2177 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 C2orf72A6NCS6 295 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 OR6C70A6NIJ9 312 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 GNB5O14775 395 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 BCKDKO14874 412 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 TM9SF1O15321 606 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 TSPAN2O60636 221 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 TBX19O60806 448 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 ICOSLGO75144 302 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 PEX11AO75192 247 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 REM1O75628 298 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 SLITRK5O94991 958 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 HTR1EP28566 365 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 MASP1P48740 699 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 TRPC1P48995 793 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 PSG6Q00889 435 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 ZNF155Q12901 538 aaPredicted RBP19.35■□□□□ 0.69
LIME1-204ENST00000476183 CHI3L2Q15782 390 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 ZNF630Q2M218 657 aaPredicted RBP19.35■□□□□ 0.69
LIME1-204ENST00000476183 LRIG3Q6UXM1 1119 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 SLC44A2Q8IWA5 706 aaPredicted RBP19.35■□□□□ 0.69
LIME1-204ENST00000476183 HOMEZQ8IX15 550 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 PGM2Q96G03 612 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 SLC35A4Q96G79 324 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 PPP3R2Q96LZ3 170 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 COL21A1Q96P44 957 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 ADOQ96SZ5 270 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 C20orf27Q9GZN8 174 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 EXO5Q9H790 373 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 ACAD8Q9UKU7 415 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 C15orf41Q9Y2V0 281 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 ACTL7BQ9Y614 415 aa19.35■□□□□ 0.69
LIME1-204ENST00000476183 BIRC5O15392 142 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 PDPK1O15530 556 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 COQ9O75208 318 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 SERPINE1P05121 402 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 PTPN6P29350 595 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 HSPB3Q12988 150 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 TIGD3Q6B0B8 471 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 RTL6Q6ICC9 239 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 SLC30A6Q6NXT4 461 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 ZNF585AQ6P3V2 769 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 ANGPTL8Q6UXH0 198 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 WDR53Q7Z5U6 358 aaPredicted RBP19.34■□□□□ 0.69
LIME1-204ENST00000476183 PPP1R14CQ8TAE6 165 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 NEIL3Q8TAT5 605 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 SARAFQ96BY9 339 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 PPCDCQ96CD2 204 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 C1orf50Q9BV19 199 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 OSBPL11Q9BXB4 747 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 DDX18Q9NVP1 670 aaKnown RBP19.34■□□□□ 0.69
LIME1-204ENST00000476183 FAM215AQ9Y5M1 114 aa19.34■□□□□ 0.69
LIME1-204ENST00000476183 ABCA12Q86UK0 2595 aa19.33■□□□□ 0.69
LIME1-204ENST00000476183 PRAMEF25A6NGN4 478 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 SNPHO15079 494 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 CLDN14O95500 239 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 HSPA4LO95757 839 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 HPNP05981 417 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 FRKP42685 505 aaPredicted RBP19.33■□□□□ 0.68
LIME1-204ENST00000476183 CDK9P50750 372 aaKnown RBP19.33■□□□□ 0.68
LIME1-204ENST00000476183 ABCE1P61221 599 aaKnown RBP19.33■□□□□ 0.68
LIME1-204ENST00000476183 SNTA1Q13424 505 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 C6orf136Q5SQH8 315 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 TMEM211Q6ICI0 200 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 LARP4Q71RC2 724 aaKnown RBP eCLIP19.33■□□□□ 0.689e-8■■□□□ 14.1
LIME1-204ENST00000476183 LIX1Q8N485 282 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 ZNF781Q8N8C0 355 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 EFHD2Q96C19 240 aaPredicted RBP19.33■□□□□ 0.68
LIME1-204ENST00000476183 SDCCAG3Q96C92 435 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 KCNK9Q9NPC2 374 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 KLRF1Q9NZS2 232 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 SH3BP4Q9P0V3 963 aa19.33■□□□□ 0.68
LIME1-204ENST00000476183 TMEM114B3SHH9 223 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 C19orf84I3L1E1 186 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 TRAPPC6AO75865 159 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 ZWINTO95229 277 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 IFI6P09912 130 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 EFNA1P20827 205 aaPredicted RBP19.32■□□□□ 0.68
LIME1-204ENST00000476183 ACVR2AP27037 513 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 ASMTP46597 345 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 NUP107P57740 925 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 PMPCAQ10713 525 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 PTGR1Q14914 329 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 ATP6AP1LQ52LC2 224 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 BEND6Q5SZJ8 279 aaPredicted RBP19.32■□□□□ 0.68
LIME1-204ENST00000476183 CROCCP2Q86T23 111 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 WDSUB1Q8N9V3 476 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 OR1J4Q8NGS1 313 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms