RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ALOX5P09917 674 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 DHPSP49366 369 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SEPHS1P49903 392 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 CXCR4P61073 352 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 STX4Q12846 297 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 FAM53BQ14153 422 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 XAF1Q6GPH4 301 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 TYW3Q6IPR3 259 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 PARP8Q8N3A8 854 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 CDRT4Q8N9R6 151 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 PRRC1Q96M27 445 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 MTHFD2LQ9H903 347 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 ENOPH1Q9UHY7 261 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 IGHV1OR21-1A0A087WYE8 117 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 A0A1W2PRQ8 180 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 NUDT21O43809 227 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 WBP4O75554 376 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 NSA2O95478 260 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 OXSR1O95747 527 aaPredicted RBP17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 PRKAR1BP31321 381 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 AVPR1BP47901 424 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 DGCR6Q14129 220 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 TCTE1Q5JU00 501 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 LYSMD4Q5XG99 296 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 PODNL1Q6PEZ8 512 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 NLGN4XQ8N0W4 816 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 VWA5B2Q8N398 1253 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 COX18Q8N8Q8 333 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 GPR151Q8TDV0 419 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 APH1BQ8WW43 257 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 PIK3R3Q92569 461 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 CTHRC1Q96CG8 243 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 CD180Q99467 661 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 SDF2Q99470 211 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 ERVMER34-1Q9H9K5 563 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 CACYBPQ9HB71 228 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 CAPN10Q9HC96 672 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 MRPS33Q9Y291 106 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 CHST2Q9Y4C5 530 aa17.08■□□□□ 0.33
SEC61A2-213ENST00000475268 TP53BP1Q12888 1972 aaPredicted RBP17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 SH3PXD2BA1X283 911 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 FAM20BO75063 409 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 ADAP00813 363 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 SPTBP11277 2137 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 POU1F1P28069 291 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 KRT20P35900 424 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 CTSKP43235 329 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 GPR68Q15743 365 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 SNAP47Q5SQN1 464 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 NIPAL1Q6NVV3 410 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 PEX5LQ8IYB4 626 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 CLIP4Q8N3C7 705 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 ZNF540Q8NDQ6 660 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 ARHGDIGQ99819 225 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 RHNO1Q9BSD3 238 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 FUZQ9BT04 418 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 IER2Q9BTL4 223 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 UCK2Q9BZX2 261 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 KLHL28Q9NXS3 571 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 PTTG2Q9NZH5 202 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 ERVK-18Q9QC07 812 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 CDC14AQ9UNH5 594 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 MGAT4BQ9UQ53 548 aa17.08■□□□□ 0.32
SEC61A2-213ENST00000475268 PCDH15Q96QU1 1955 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 CACNA1IQ9P0X4 2223 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 OR2W5A6NFC9 320 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 GLB1P16278 677 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 JUNBP17275 347 aaPredicted RBP17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 CHMP24386 653 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 TTKP33981 857 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 ARL4DP49703 201 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 MAPK10P53779 464 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 PTGES3Q15185 160 aaKnown RBP17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 DCST2Q5T1A1 773 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 GPR107Q5VW38 600 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 TMEM236Q5W0B7 351 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 OR6C4Q8NGE1 309 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 OR52R1Q8NGF1 315 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 MAFAQ8NHW3 353 aaPredicted RBP17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 RBM18Q96H35 190 aaKnown RBP17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 ELF4Q99607 663 aaPredicted RBP17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 TUBA1CQ9BQE3 449 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 DUSP22Q9NRW4 184 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 MAN2C1Q9NTJ4 1040 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 ZNF232Q9UNY5 417 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 IFT52Q9Y366 437 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 CSNK1G3Q9Y6M4 447 aa17.07■□□□□ 0.32
SEC61A2-213ENST00000475268 CLDN24A6NM45 220 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 TGFBR3LH3BV60 316 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 DUX1O43812 170 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 CTNSO60931 367 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 GIMD1P0DJR0 217 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 SLC5A2P31639 672 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 ARRB1P49407 418 aaPredicted RBP17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 UGT2B15P54855 530 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 TAS2R41P59536 307 aa17.06■□□□□ 0.32
SEC61A2-213ENST00000475268 BTG2P78543 158 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms