RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 KLRF1Q9NZS2 232 aa22.01■■□□□ 1.11
CPNE1-223ENST00000475146 OR14I1A6ND48 311 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 UPK1AO00322 258 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 AQP7O14520 342 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 BCKDKO14874 412 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 TBX19O60806 448 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 DDX5P17844 614 aaKnown RBP22■■□□□ 1.11
CPNE1-223ENST00000475146 GRK2P25098 689 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 IL12BP29460 328 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 SLC1A6P48664 564 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 PDE7AQ13946 482 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 C6orf136Q5SQH8 315 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 R3HCC1LQ7Z5L2 792 aaKnown RBP22■■□□□ 1.11
CPNE1-223ENST00000475146 OR2L13Q8N349 312 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 OR5M9Q8NGP3 310 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 PHF10Q8WUB8 498 aaKnown RBP22■■□□□ 1.11
CPNE1-223ENST00000475146 ZBED6CLQ96FA7 236 aaPredicted RBP22■■□□□ 1.11
CPNE1-223ENST00000475146 PPP1R36Q96LQ0 422 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 ADOQ96SZ5 270 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 SLC6A15Q9H2J7 730 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 TNFRSF10DQ9UBN6 386 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 RAP2CQ9Y3L5 183 aa22■■□□□ 1.11
CPNE1-223ENST00000475146 DNAJC13O75165 2243 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 A0A1B0GVC2 190 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 TMEM120BA0PK00 339 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 PRAMEF25A6NGN4 478 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 OR6C70A6NIJ9 312 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 PRSS44E7EML9 344 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 ADAM10O14672 748 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 GNB5O14775 395 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 SUSD5O60279 629 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 HCN1O60741 890 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 ABCB7O75027 752 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 TRPC1P48995 793 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 MANFP55145 182 aaKnown RBP21.99■■□□□ 1.11
CPNE1-223ENST00000475146 PSPHP78330 225 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 STX3Q13277 289 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 IL23RQ5VWK5 629 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 SLC30A6Q6NXT4 461 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 ANGPTL8Q6UXH0 198 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 LARP4Q71RC2 724 aaKnown RBP eCLIP21.99■■□□□ 1.11
CPNE1-223ENST00000475146 MGARPQ8TDB4 240 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 TMCO6Q96DC7 493 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 MTERF3Q96E29 417 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 TMEM41AQ96HV5 264 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 DMRTA2Q96SC8 542 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 PNPLA3Q9NST1 481 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 ACAD8Q9UKU7 415 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 C15orf41Q9Y2V0 281 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 HRH3Q9Y5N1 445 aa21.99■■□□□ 1.11
CPNE1-223ENST00000475146 SCAMP2O15127 329 aaKnown RBP21.98■■□□□ 1.11
CPNE1-223ENST00000475146 TRAPPC6AO75865 159 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 RPL3P39023 403 aaKnown RBP21.98■■□□□ 1.11
CPNE1-223ENST00000475146 PSG6Q00889 435 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 EFR3AQ14156 821 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 PTGR1Q14914 329 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 TOMM20Q15388 145 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 ZNHIT3Q15649 155 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-223ENST00000475146 GXYLT1Q4G148 440 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 TMEM81Q6P7N7 255 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 XKRXQ6PP77 449 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 SZRD1Q7Z422 152 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 WDR53Q7Z5U6 358 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-223ENST00000475146 OR4N2Q8NGD1 307 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 SARAFQ96BY9 339 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 EFHD2Q96C19 240 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-223ENST00000475146 SLC35A4Q96G79 324 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 GNRHR2Q96P88 292 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 C20orf27Q9GZN8 174 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 GALNT9Q9HCQ5 603 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 ACKR4Q9NPB9 350 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 EQTNQ9NQ60 294 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 SPRR3Q9UBC9 169 aa21.98■■□□□ 1.11
CPNE1-223ENST00000475146 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-223ENST00000475146 C2orf72A6NCS6 295 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 TSPAN2O60636 221 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 ICOSLGO75144 302 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 SNUPNO95149 360 aaKnown RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 PSMG1O95456 288 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 IFI6P09912 130 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 PRPS2P11908 318 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 EFNA1P20827 205 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 ENDOUP21128 410 aaKnown RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 ELAVL4P26378 380 aaKnown RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 CDK9P50750 372 aaKnown RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 RPL14P50914 215 aaKnown RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 MAGOHP61326 146 aaKnown RBP21.97■■□□□ 1.11
CPNE1-223ENST00000475146 SNTA1Q13424 505 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 ART3Q13508 389 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 EMC4Q5J8M3 183 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 WLSQ5T9L3 541 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 FNDC7Q5VTL7 733 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 TIGD3Q6B0B8 471 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 ZNF585AQ6P3V2 769 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 OR7A2PQ8NGA2 310 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 OR1J4Q8NGS1 313 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 SORT1Q99523 831 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 TMBIM4Q9HC24 238 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 Q9N2J8 555 aa21.97■■□□□ 1.11
CPNE1-223ENST00000475146 ACSS1Q9NUB1 689 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms