RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SGK494L7N484 410 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SULT1C2O00338 296 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 NRG2O14511 850 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 SIGLEC5O15389 551 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 KIAA0513O60268 411 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CSO75390 466 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 MOSPD3O75425 235 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SOX30O94993 753 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PAPSS2O95340 614 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 CXCL10P02778 98 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MT-ND1P03886 318 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 F13BP05160 661 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ATXN1LP0C7T5 689 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 LHCGRP22888 699 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ART1P52961 327 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 KCNK10P57789 538 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 RAP1AP62834 184 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CCL7P80098 99 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PITPNAQ00169 270 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SORDQ00796 357 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 E2F1Q01094 437 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SREBF2Q12772 1141 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FOXE3Q13461 319 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 BAATQ14032 418 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 KEAP1Q14145 624 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 HLFQ16534 295 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MEP1AQ16819 746 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 NRN1LQ496H8 165 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ATP13A5Q4VNC0 1218 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SOWAHCQ53LP3 525 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 DESI1Q6ICB0 168 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MED27Q6P2C8 311 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 VN1R5Q7Z5H4 357 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SLC26A11Q86WA9 606 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 C16orf71Q8IYS4 520 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 SHISA5Q8N114 240 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TMEM132CQ8N3T6 1108 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MARVELD2Q8N4S9 558 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FEZF2Q8TBJ5 459 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 DCAKDQ8WVC6 231 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TMEM234Q8WY98 164 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 DNASE1L2Q92874 299 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SLC35C1Q96A29 364 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FAF2Q96CS3 445 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 WBP1Q96G27 269 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 RPL10LQ96L21 214 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 SENP8Q96LD8 212 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SFXN2Q96NB2 322 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SEPT5Q99719 369 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 ECSITQ9BQ95 431 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SLC35A5Q9BS91 424 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FNDC11Q9BVV2 318 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 UGT2B28Q9BY64 529 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TOR3AQ9H497 397 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ZNF395Q9H8N7 513 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 IPPKQ9H8X2 491 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 WDR41Q9HAD4 459 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ROPN1Q9HAT0 212 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 NPAP1Q9NZP6 1156 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FBXL17Q9UF56 701 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PHF11Q9UIL8 331 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PURGQ9UJV8 347 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 ZNF221Q9UK13 617 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PITPNM2Q9BZ72 1349 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 USP42Q9H9J4 1324 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 MBD5Q9P267 1494 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MLH3Q9UHC1 1453 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CEP164Q9UPV0 1460 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 KDM5DQ9BY66 1539 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TMEM131LA2VDJ0 1609 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 USP47Q96K76 1375 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TMEM2Q9UHN6 1383 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 A0A1W2PQM1 296 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MBLAC1A4D2B0 266 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 TMEM150BA6NC51 233 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CXorf65A6NEN9 183 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 YDJCA8MPS7 323 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CENPXA8MT69 81 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ISM1B1AKI9 464 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ADAM10O14672 748 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CHST10O43529 356 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 RFPL2O75678 378 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 AQP8O94778 261 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 AP2A1O95782 977 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SERPINA1P01009 418 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 GLB1P16278 677 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 UQCRC2P22695 453 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SLC6A2P23975 617 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 S100A11P31949 105 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CNR2P34972 360 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 HPCAL1P37235 193 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 GRIA3P42263 894 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 HTR6P50406 440 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SHC2P98077 582 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 INCA1Q0VD86 236 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ARHGEF7Q14155 803 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 EFNB3Q15768 340 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MRPL23Q16540 153 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 ASTE1Q2TB18 679 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 RSBN1Q5VWQ0 802 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms