RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 RND1Q92730 232 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 AMDHD1Q96NU7 426 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 TSSK3Q96PN8 268 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 EML4Q9HC35 981 aaKnown RBP16.4■□□□□ 0.22
UPF3A-203ENST00000474056 TAS2R9Q9NYW1 312 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 KLRF1Q9NZS2 232 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 GIMAP2Q9UG22 337 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 C15orf41Q9Y2V0 281 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 TRAF6Q9Y4K3 522 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 DOCK7Q96N67 2140 aa16.4■□□□□ 0.22
UPF3A-203ENST00000474056 A0A087WV62 115 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 C2orf72A6NCS6 295 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 OR6C70A6NIJ9 312 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 TSPAN2O60636 221 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 WDR1O75083 606 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 ICOSLGO75144 302 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 COQ9O75208 318 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 TRAPPC6AO75865 159 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 PTPN6P29350 595 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 KIR3DL1P43629 444 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 CDK9P50750 372 aaKnown RBP16.39■□□□□ 0.21
UPF3A-203ENST00000474056 PSG6Q00889 435 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 ANKRD26P1Q6NSI1 321 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 ANGPTL8Q6UXH0 198 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 SLC44A2Q8IWA5 706 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-203ENST00000474056 OR4N2Q8NGD1 307 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 OR1J4Q8NGS1 313 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 OR6Y1Q8NGX8 325 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 CLHC1Q8NHS4 586 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 ZBTB9Q96C00 473 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 SLC35A4Q96G79 324 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 PKNOX2Q96KN3 472 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 CCT7Q99832 543 aa16.39■□□□□ 0.21
UPF3A-203ENST00000474056 PRAMEF25A6NGN4 478 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 UPK1AO00322 258 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 PLOD2O00469 737 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 SNPHO15079 494 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 RGS16O15492 202 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-203ENST00000474056 AKAP10O43572 662 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 SLITRK5O94991 958 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 PSMG1O95456 288 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 HPNP05981 417 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 CRYZQ08257 329 aaKnown RBP16.38■□□□□ 0.21
UPF3A-203ENST00000474056 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 TIGD3Q6B0B8 471 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 SLC30A6Q6NXT4 461 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 B3GNT6Q6ZMB0 384 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 ZNF551Q7Z340 670 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-203ENST00000474056 CCDC71Q8IV32 467 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-203ENST00000474056 OR2L13Q8N349 312 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 ASB5Q8WWX0 329 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 CIDECQ96AQ7 238 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-203ENST00000474056 COL21A1Q96P44 957 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 ADOQ96SZ5 270 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 TTYH2Q9BSA4 534 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 ALKBH4Q9NXW9 302 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 BAIAP2L1Q9UHR4 511 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 ZDHHC2Q9UIJ5 367 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 C19orf53Q9UNZ5 99 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-203ENST00000474056 MAPRE3Q9UPY8 281 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 SLC6A5Q9Y345 797 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 TEX15Q9BXT5 2789 aa16.38■□□□□ 0.21
UPF3A-203ENST00000474056 C15orf38-AP3S2A0A0A6YYH1 394 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 FAM90A27PA6NNH2 459 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 PDPK1O15530 556 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 CTIFO43310 598 aaKnown RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 SKAP2O75563 359 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 ELAVL4P26378 380 aaKnown RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 IL12BP29460 328 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 CHRNB4P30926 498 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 SERPINB5P36952 375 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 HSPB3Q12988 150 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 SNTA1Q13424 505 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 TOMM20Q15388 145 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 XKR7Q5GH72 579 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 WIPI1Q5MNZ9 446 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 C1orf185Q5T7R7 199 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 CES4AQ5XG92 561 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 ACAD11Q709F0 780 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 LARP4Q71RC2 724 aaKnown RBP eCLIP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 WDR53Q7Z5U6 358 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 EXOC3L1Q86VI1 746 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 EFHD2Q96C19 240 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 TMCO6Q96DC7 493 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 ELP4Q96EB1 424 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 ZNF764Q96H86 408 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 C3orf30Q96M34 536 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 ZIM3Q96PE6 472 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 REEP4Q9H6H4 257 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 DDX18Q9NVP1 670 aaKnown RBP16.37■□□□□ 0.21
UPF3A-203ENST00000474056 OR10H1Q9Y4A9 318 aa16.37■□□□□ 0.21
UPF3A-203ENST00000474056 ABCA12Q86UK0 2595 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 NKX2-6A6NCS4 301 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 TBX19O60806 448 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 ABCB7O75027 752 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 LYPLA1O75608 230 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-203ENST00000474056 GLI4P10075 376 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 BCKDHAP12694 445 aa16.36■□□□□ 0.21
UPF3A-203ENST00000474056 COX6B1P14854 86 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms