RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PGLYRP2Q96PD5 576 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 IWS1Q96ST2 819 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 TRIM51Q9BSJ1 452 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 APOOQ9BUR5 198 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 RBM4Q9BWF3 364 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 RAB33BQ9H082 229 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 NT5DC2Q9H857 520 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 SDF2L1Q9HCN8 221 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 STARD5Q9NSY2 213 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 DEPPQ9NTK1 212 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 PROCRQ9UNN8 238 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 EIF3LQ9Y262 564 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 EXOGQ9Y2C4 368 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 AP4B1Q9Y6B7 739 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 MTUS2Q5JR59 1369 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 PARD3Q8TEW0 1356 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 KIF27Q86VH2 1401 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 YEATS2Q9ULM3 1422 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 POLA1P09884 1462 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 RPRD2Q5VT52 1461 aaKnown RBP3.58□□□□□ -1.84
BRCA1-212ENST00000473961 CUX1P39880 1505 aa3.58□□□□□ -1.84
BRCA1-212ENST00000473961 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 MPTX1A8MV57 137 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ATP8B1O43520 1251 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 EDIL3O43854 480 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SDC3O75056 442 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 PALMO75781 387 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SP1P08047 785 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 FCGR3AP08637 254 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SNRPCP09234 159 aaKnown RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ZCCHC18P0CG32 403 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 RPA2P15927 270 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 GLRA2P23416 452 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 MAT2AP31153 395 aaKnown RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 CHI3L1P36222 383 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 MAGEA9P43362 315 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 HTR5AP47898 357 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ACADVLP49748 655 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 EMDP50402 254 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 RPS27AP62979 156 aaKnown RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SPIBQ01892 262 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 NAAAQ02083 359 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ZP4Q12836 540 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF699Q32M78 642 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ANKRD55Q3KP44 614 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 TMEM30BQ3MIR4 351 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SPATA46Q5T0L3 261 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 NCR3LG1Q68D85 454 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 LEG1Q6P5S2 330 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SLC39A4Q6P5W5 647 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 BLOC1S2Q6QNY1 142 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 FGD6Q6ZV73 1430 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 LRRC70Q7Z2Q7 622 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ERASQ7Z444 233 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 CLASP1Q7Z460 1538 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 CEACAM19Q7Z692 300 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 LRRTM1Q86UE6 522 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 VASH2Q86V25 355 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 NBPF5PQ86XG9 351 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 CATSPER3Q86XQ3 398 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF781Q8N8C0 355 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 THOC2Q8NI27 1593 aaKnown RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 SLC5A11Q8WWX8 675 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 LHX4Q969G2 390 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 TADA1Q96BN2 335 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ATXN7L3BQ96GX2 97 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 FAM210AQ96ND0 272 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 TTC25Q96NG3 672 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 RCHY1Q96PM5 261 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 CABLES2Q9BTV7 478 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ALG12Q9BV10 488 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 GPR174Q9BXC1 333 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 LRRCC1Q9C099 1032 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 TMEM117Q9H0C3 514 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 ALG9Q9H6U8 611 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 NRN1Q9NPD7 142 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 DUS2Q9NX74 493 aaKnown RBP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 BARHL2Q9NY43 387 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 GPR83Q9NYM4 423 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 RARRES3Q9UL19 164 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 NIP7Q9Y221 180 aaKnown RBP eCLIP3.57□□□□□ -1.84
BRCA1-212ENST00000473961 PYGO1Q9Y3Y4 419 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 OR10H1Q9Y4A9 318 aa3.57□□□□□ -1.84
BRCA1-212ENST00000473961 MYH15Q9Y2K3 1946 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 BCORL1Q5H9F3 1711 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 AQRO60306 1485 aaKnown RBP eCLIP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 NKTRP30414 1462 aaKnown RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 CAMSAP2Q08AD1 1489 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 TEX14Q8IWB6 1497 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 KANK1Q14678 1352 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 USP47Q96K76 1375 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 GRIN2DO15399 1336 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 PPIAL4CA0A0B4J2A2 164 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF724A8MTY0 619 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-212ENST00000473961 PDHXO00330 501 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 RIPK2O43353 540 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 PDE5AO76074 875 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 UGT2B4P06133 528 aa3.56□□□□□ -1.84
BRCA1-212ENST00000473961 IVLP07476 585 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms