RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SRP54P61011 504 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 RELQ04864 619 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 SLC3A1Q07837 685 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 KLHL30Q0D2K2 578 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 MFAP5Q13361 173 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TSTA3Q13630 321 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 PDE7AQ13946 482 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TRADDQ15628 312 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ZNF77Q15935 545 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 CA9Q16790 459 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ODF3L2Q3SX64 289 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ARMCX4Q5H9R4 360 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ATP1A1-AS1Q5TC04 95 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 LCN1P1Q5VSP4 162 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PM20D1Q6GTS8 502 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 RAET1GQ6H3X3 334 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 OR6B2Q6IFH4 312 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 FAM166AQ6J272 317 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 C8orf82Q6P1X6 216 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 ZNF549Q6P9A3 640 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 XKRXQ6PP77 449 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 WDR88Q6ZMY6 472 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 KCTD8Q6ZWB6 473 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PIWIL4Q7Z3Z4 852 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 EXOC3L1Q86VI1 746 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 HPS6Q86YV9 775 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 CCDC60Q8IWA6 550 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 MMD2Q8IY49 270 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 APCDD1Q8J025 514 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 KDM8Q8N371 416 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 CLIP4Q8N3C7 705 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 SLC25A45Q8N413 288 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 METTL27Q8N6F8 245 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 LMNTD1Q8N9Z9 388 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 BCL2L2Q92843 193 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 PSMG2Q969U7 264 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 FAM46BQ96A09 425 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 SYAP1Q96A49 352 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 PNPLA2Q96AD5 504 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 BIRC7Q96CA5 298 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 RTP4Q96DX8 246 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ZNF274Q96GC6 653 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 VPS39Q96JC1 886 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 MARK4Q96L34 752 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PGLYRP2Q96PD5 576 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TSSK2Q96PF2 358 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 BTBD9Q96Q07 612 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 DDX50Q9BQ39 737 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 RHNO1Q9BSD3 238 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TRIM7Q9C029 511 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 MTMR12Q9C0I1 747 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 SLC39A8Q9C0K1 460 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 P2RY12Q9H244 342 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 CXCL16Q9H2A7 254 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 NXF3Q9H4D5 531 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 LRTM1Q9HBL6 345 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 VAT1LQ9HCJ6 419 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 POLE3Q9NRF9 147 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 FAM207AQ9NSI2 230 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 TXLNGQ9NUQ3 528 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TMEM30AQ9NV96 361 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 COPS7AQ9UBW8 275 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 LRWD1Q9UFC0 647 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PISDQ9UG56 409 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 KCNN3Q9UGI6 736 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 UBQLN2Q9UHD9 624 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TEKT2Q9UIF3 430 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ZDHHC2Q9UIJ5 367 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 NOCTQ9UK39 431 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 TSPAN16Q9UKR8 245 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 BLOC1S6Q9UL45 172 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PLA2G4CQ9UP65 541 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 EXOC7Q9UPT5 735 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 VWFP04275 2813 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ZANQ9Y493 2812 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 HCFC1P51610 2035 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 PIKFYVEQ9Y2I7 2098 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 C2orf92A0A1B0GVN3 265 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 MACROD2A1Z1Q3 448 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CCDC162PA2VCL2 907 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 EME2A4GXA9 379 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 C5orf51A6NDU8 294 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TLCD2A6NGC4 264 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ZSCAN5CA6NGD5 496 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 C2orf81A6NN90 581 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 WASH3PC4AMC7 463 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 NTN3O00634 580 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 PSMD3O43242 534 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SYNGR3O43761 229 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SCO2O43819 266 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 OR10H2O60403 315 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 DPM1O60762 260 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 LDB3O75112 727 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SCGB2A1O75556 95 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ATP6AP2O75787 350 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 OR6B1O95007 311 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 AKR7A3O95154 331 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 PIGNO95427 931 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CCNE2O96020 404 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ATP1A1P05023 1023 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms