RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 HBA1P69905 142 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 OLR1P78380 273 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 TARDBPQ13148 414 aaKnown RBP eCLIP13.88□□□□□ -0.19
LMNA-213ENST00000473598 KRR1Q13601 381 aaKnown RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 COL9A2Q14055 689 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 FAM53BQ14153 422 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 GPR19Q15760 415 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 ZNF181Q2M3W8 571 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 AURKBQ96GD4 344 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 CENPNQ96H22 339 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 UQCC2Q9BRT2 126 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 C9orf16Q9BUW7 83 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 THUMPD3Q9BV44 507 aaKnown RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 GON7Q9BXV9 100 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SYNDIG1Q9H7V2 258 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SLC35C2Q9NQQ7 365 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SAGE2PA6NJ88 616 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 WASHC1A8K0Z3 465 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SGK494L7N484 410 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 FOXS1O43638 330 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 TPST1O60507 370 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 OR2B3O76000 313 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 FOSL1P15407 271 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 GGT1P19440 569 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 ACP1P24666 158 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 OR3A3P47888 321 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 MRPS15P82914 257 aaKnown RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 GRM7Q14831 915 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SLCO6A1Q86UG4 719 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 CA13Q8N1Q1 262 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 TTC29Q8NA56 475 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 OR5T3Q8NGG3 340 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 OR9A4Q8NGU2 314 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 PHF10Q8WUB8 498 aaKnown RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 FKBP10Q96AY3 582 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 GFM1Q96RP9 751 aaKnown RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 CPPED1Q9BRF8 314 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 CHID1Q9BWS9 393 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 PRDM9Q9NQV7 894 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 TAS2R9Q9NYW1 312 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 IFT80Q9P2H3 777 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 ZNF282Q9UDV7 671 aaPredicted RBP13.88□□□□□ -0.19
LMNA-213ENST00000473598 VPS4AQ9UN37 437 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 PCNX2A6NKB5 2137 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 SPTBN2O15020 2390 aa13.88□□□□□ -0.19
LMNA-213ENST00000473598 FAM149AA5PLN7 773 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 ERVH48-1M5A8F1 160 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 NTN3O00634 580 aaPredicted RBP13.87□□□□□ -0.19
LMNA-213ENST00000473598 UPK1BO75841 260 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 SEC24DO94855 1032 aaPredicted RBP13.87□□□□□ -0.19
LMNA-213ENST00000473598 NSA2O95478 260 aaKnown RBP13.87□□□□□ -0.19
LMNA-213ENST00000473598 GP1BAP07359 652 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 MAPK10P53779 464 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 DSTNP60981 165 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 SKP1P63208 163 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 AQP6Q13520 282 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 DGUOKQ16854 277 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 ZNF544Q6NX49 715 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 KCTD20Q7Z5Y7 419 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 EPHX4Q8IUS5 362 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 OR2T12Q8NG77 320 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 OR1L3Q8NH93 324 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 OR5P2Q8WZ92 322 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 ZBED6CLQ96FA7 236 aaPredicted RBP13.87□□□□□ -0.19
LMNA-213ENST00000473598 LHPPQ9H008 270 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 ACSS1Q9NUB1 689 aaPredicted RBP13.87□□□□□ -0.19
LMNA-213ENST00000473598 FTSJ1Q9UET6 329 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 AP3M1Q9Y2T2 418 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 SPACA6W5XKT8 324 aa13.87□□□□□ -0.19
LMNA-213ENST00000473598 A0A0A6YYC8 382 aaPredicted RBP13.86□□□□□ -0.19
LMNA-213ENST00000473598 I3L1I5 382 aaPredicted RBP13.86□□□□□ -0.19
LMNA-213ENST00000473598 hCG_2039718K7EN88 272 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 CLIC1O00299 241 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 BET1O15155 118 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 RDH16O75452 317 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 KCNK2O95069 426 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 PRKACAP17612 351 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 TLX1P31314 330 aaPredicted RBP13.86□□□□□ -0.19
LMNA-213ENST00000473598 MANFP55145 182 aaKnown RBP13.86□□□□□ -0.19
LMNA-213ENST00000473598 MLC1Q15049 377 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 ATP6AP1Q15904 470 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 FAM214AQ32MH5 1076 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 AGAP6Q5VW22 663 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 XAF1Q6GPH4 301 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 SLC16A12Q6ZSM3 486 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 CBR4Q8N4T8 237 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 RCBTB1Q8NDN9 531 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 OR6F1Q8NGZ6 308 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 OR10A6Q8NH74 314 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 ZNF501Q96CX3 271 aaPredicted RBP13.86□□□□□ -0.19
LMNA-213ENST00000473598 CCDC74BQ96LY2 380 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 AGAP4Q96P64 663 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 TMEM246Q9BRR3 403 aa13.86□□□□□ -0.19
LMNA-213ENST00000473598 KAT8Q9H7Z6 458 aaKnown RBP13.86□□□□□ -0.19
LMNA-213ENST00000473598 GORASP2Q9H8Y8 452 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms