RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 B3GNT6Q6ZMB0 384 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 SLC35A4Q96G79 324 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 ZNF764Q96H86 408 aaPredicted RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 AMDHD1Q96NU7 426 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 GNRHR2Q96P88 292 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 KLRF1Q9NZS2 232 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 RNF6Q9Y252 685 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 PRAMEF25A6NGN4 478 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 GNB5O14775 395 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 PIP5K1BO14986 540 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 TRAPPC6AO75865 159 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 HPNP05981 417 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 CHRNB4P30926 498 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 KRT20P35900 424 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 PTGDSP41222 190 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 GALNTL6Q49A17 601 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 RFTN2Q52LD8 501 aaPredicted RBP20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 TIGD3Q6B0B8 471 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 SLC44A2Q8IWA5 706 aaPredicted RBP20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 OR1J4Q8NGS1 313 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 AGR3Q8TD06 166 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 GFM2Q969S9 779 aaKnown RBP20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 TMCO6Q96DC7 493 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 TSSK3Q96PN8 268 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 DDX18Q9NVP1 670 aaKnown RBP20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 C19orf53Q9UNZ5 99 aaPredicted RBP20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 PCDHGB3Q9Y5G1 929 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 FAM215AQ9Y5M1 114 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 NOTCH2Q04721 2471 aa20.61■□□□□ 0.89
PTP4A1-203ENST00000473334 C19orf84I3L1E1 186 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 SNPHO15079 494 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 PDPK1O15530 556 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 CTIFO43310 598 aaKnown RBP20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 TSPAN2O60636 221 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 ICOSLGO75144 302 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 TUBBP07437 444 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 HOXD4P09016 255 aaPredicted RBP20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 IFI6P09912 130 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 COX6B1P14854 86 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 GABRA1P14867 456 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 PTPN6P29350 595 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 IL12BP29460 328 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 EFR3AQ14156 821 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 RTL6Q6ICC9 239 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 ANGPTL8Q6UXH0 198 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 OR2L13Q8N349 312 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 OR6Y1Q8NGX8 325 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 TTYH2Q9BSA4 534 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 REEP4Q9H6H4 257 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 GALNT9Q9HCQ5 603 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 OR10H1Q9Y4A9 318 aa20.6■□□□□ 0.89
PTP4A1-203ENST00000473334 C15orf38-AP3S2A0A0A6YYH1 394 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 UPK1AO00322 258 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 TBX19O60806 448 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 PSMG1O95456 288 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 ARRB2P32121 409 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 PTGER4P35408 488 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 PSG6Q00889 435 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 TOMM20Q15388 145 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 C1orf185Q5T7R7 199 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 ANKRD26P1Q6NSI1 321 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 LARP4Q71RC2 724 aaKnown RBP eCLIP20.59■□□□□ 0.891e-6■□□□□ 10.2
PTP4A1-203ENST00000473334 ELP4Q96EB1 424 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 PPP3R2Q96LZ3 170 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 ADOQ96SZ5 270 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 SSU72Q9NP77 194 aaKnown RBP20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 ALKBH4Q9NXW9 302 aa20.59■□□□□ 0.89
PTP4A1-203ENST00000473334 ARHGAP21Q5T5U3 1957 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 AKAP10O43572 662 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 GLI4P10075 376 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 ASMTP46597 345 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 PNLIPRP2P54317 469 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 CRYZQ08257 329 aaKnown RBP20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 ZNF385BQ569K4 471 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 XKR7Q5GH72 579 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 EXOC3L1Q86VI1 746 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 CCDC71Q8IV32 467 aaPredicted RBP20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 NUDCD3Q8IVD9 361 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 ULK2Q8IYT8 1036 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 LILRB4Q8NHJ6 448 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 CLHC1Q8NHS4 586 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 PPCDCQ96CD2 204 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 BAIAP2L1Q9UHR4 511 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 ZDHHC2Q9UIJ5 367 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 MAPRE3Q9UPY8 281 aa20.58■□□□□ 0.89
PTP4A1-203ENST00000473334 ADGRG4Q8IZF6 3080 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 C2orf72A6NCS6 295 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 TMEM114B3SHH9 223 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 SNRPB2P08579 225 aaKnown RBP20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 BCKDHAP12694 445 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 PRF1P14222 555 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 MAPK1P28482 360 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 KIR3DL1P43629 444 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 SERPINB4P48594 390 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 MRPS22P82650 360 aaKnown RBP20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 HSPB3Q12988 150 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 PDE7AQ13946 482 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 ZNF551Q7Z340 670 aaPredicted RBP20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 MCEMP1Q8IX19 187 aa20.57■□□□□ 0.88
PTP4A1-203ENST00000473334 FAM83FQ8NEG4 500 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms