RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PLSCR4Q9NRQ2 329 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 OPTCQ9UBM4 332 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 ANGPTL3Q9Y5C1 460 aa12.53□□□□□ -0.4
SMURF1-203ENST00000472627 MAGED1Q9Y5V3 778 aaPredicted RBP12.53□□□□□ -0.4
SMURF1-203ENST00000472627 GOLGA6L10A0A0M3HER8 536 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 TMPRSS11DO60235 418 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 REM1O75628 298 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 SOD3P08294 240 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 CT62P0C5K7 136 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 EPORP19235 508 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 HNF1AP20823 631 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 DRD5P21918 477 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 GRK2P25098 689 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 IL12BP29460 328 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 NUDT6P53370 316 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 POU4F1Q01851 419 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 FAPQ12884 760 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 CUL3Q13618 768 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 CYP1B1Q16678 543 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 ALKBH2Q6NS38 261 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 TRMT10BQ6PF06 316 aaKnown RBP12.52□□□□□ -0.41
SMURF1-203ENST00000472627 DNM1P46Q6ZS02 220 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.52□□□□□ -0.41
SMURF1-203ENST00000472627 TMEM139Q8IV31 216 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 TRIM58Q8NG06 486 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 EXT2Q93063 718 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 LRRC39Q96DD0 335 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 GMPPAQ96IJ6 420 aaPredicted RBP12.52□□□□□ -0.41
SMURF1-203ENST00000472627 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
SMURF1-203ENST00000472627 TNFRSF13CQ96RJ3 184 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 RHOJQ9H4E5 214 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 PTGES2Q9H7Z7 377 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 PPP4R1LQ9P1A2 415 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 ASIC3Q9UHC3 531 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 CHMP2BQ9UQN3 213 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 TSC22D4Q9Y3Q8 395 aa12.52□□□□□ -0.41
SMURF1-203ENST00000472627 WASHC1A8K0Z3 465 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 H3BML4 177 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 K7EPI3 171 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 SSX4O60224 188 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 ZIC3O60481 467 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 EEDO75530 441 aaKnown RBP12.51□□□□□ -0.41
SMURF1-203ENST00000472627 BANF1O75531 89 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 DANCRP0C864 163 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 CCDC166P0CW27 439 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 HK1P19367 917 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 PPICP45877 212 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 VLDLRP98155 873 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 FRG1Q14331 258 aaKnown RBP12.51□□□□□ -0.41
SMURF1-203ENST00000472627 CYB5R2Q6BCY4 276 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 OR5M10Q6IEU7 315 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 TMBIM1Q969X1 311 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 C11orf24Q96F05 449 aaPredicted RBP12.51□□□□□ -0.41
SMURF1-203ENST00000472627 SLC35A4Q96G79 324 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
SMURF1-203ENST00000472627 HDHD5Q9BXW7 423 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 SDHAF3Q9NRP4 125 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 GLRX2Q9NS18 164 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 PAQR5Q9NXK6 330 aaPredicted RBP12.51□□□□□ -0.41
SMURF1-203ENST00000472627 NUDT4Q9NZJ9 180 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 WHRNQ9P202 907 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 TXNDC16Q9P2K2 825 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 DTX4Q9Y2E6 619 aa12.51□□□□□ -0.41
SMURF1-203ENST00000472627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.413e-19■■■■□ 20.9
SMURF1-203ENST00000472627 PGRMC2O15173 223 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 TO15178 435 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 GPRIN2O60269 458 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 SLC25A16P16260 332 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 CSNK2A2P19784 350 aaPredicted RBP12.5□□□□□ -0.41
SMURF1-203ENST00000472627 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
SMURF1-203ENST00000472627 BSGP35613 385 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 ELK3P41970 407 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 FNTAP49354 379 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 B3GALT5-AS1P59052 145 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 LOXL1Q08397 574 aaPredicted RBP12.5□□□□□ -0.41
SMURF1-203ENST00000472627 MAP4K2Q12851 820 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 GUSBP1Q15486 140 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 ZNF672Q499Z4 452 aaPredicted RBP12.5□□□□□ -0.41
SMURF1-203ENST00000472627 MSS51Q4VC12 460 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 LIPJQ5W064 366 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 DNAJC14Q6Y2X3 702 aaPredicted RBP12.5□□□□□ -0.41
SMURF1-203ENST00000472627 PAGE2Q7Z2X7 111 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 EXOC3L1Q86VI1 746 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 METTL25Q8N6Q8 603 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 RAB3IL1Q8TBN0 382 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 STAG3L4Q8TBR4 150 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 ADOQ96SZ5 270 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 AHSPQ9NZD4 102 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 PSME2Q9UL46 239 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 MCTS1Q9ULC4 181 aaKnown RBP12.5□□□□□ -0.41
SMURF1-203ENST00000472627 PLLPQ9Y342 182 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 PSAT1Q9Y617 370 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 AP4B1Q9Y6B7 739 aa12.5□□□□□ -0.41
SMURF1-203ENST00000472627 FAM234BA2RU67 622 aa12.49□□□□□ -0.41
SMURF1-203ENST00000472627 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
SMURF1-203ENST00000472627 SUPT3HB4E1H0 165 aa12.49□□□□□ -0.41
SMURF1-203ENST00000472627 DNALI1O14645 258 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms