RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	GAR1	Q9NY12	217 aa	Known RBP	3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	SPHK1	Q9NYA1	384 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	CD274	Q9NZQ7	290 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	VAPA	Q9P0L0	249 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	PAK5	Q9P286	719 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	GUCA1B	Q9UMX6	200 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	MOK	Q9UQ07	419 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	OSGIN2	Q9Y236	505 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	PIGL	Q9Y2B2	252 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	CA5B	Q9Y2D0	317 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	GSTK1	Q9Y2Q3	226 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	TCAF1	Q9Y4C2	921 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	LRP12	Q9Y561	859 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	OAS3	Q9Y6K5	1087 aa	Known RBP	3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	ARHGEF10	O15013	1369 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	HEG1	Q9ULI3	1381 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	PLEKHG1	Q9ULL1	1385 aa		3.02	□□□□□ -1.93
TTC3-214	ENST00000472398	FAM95C	A0A1B0GW59	222 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	NKX6-3	A6NJ46	265 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398		E9PAM4	449 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	AZIN1	O14977	448 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	TEX33	O43247	280 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	FZD7	O75084	574 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ZNF217	O75362	1048 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CREG1	O75629	220 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	PAPSS2	O95340	614 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	MOCS3	O95396	460 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CTDNEP1	O95476	244 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	LDOC1	O95751	146 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SYF2	O95926	243 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	PPBP	P02775	128 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SERPINB2	P05120	415 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	GRP	P07492	148 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CHRNG	P07510	517 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	MMP10	P09238	476 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	FBP1	P09467	338 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	HOXC6	P09630	235 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	OCM	P0CE72	109 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RRAS	P10301	218 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	NR2F6	P10588	404 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	HSPD1	P10809	573 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	FCGR1A	P12314	374 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ST6GAL1	P15907	406 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ZP3	P21754	424 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	DCK	P27707	260 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ACADL	P28330	430 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RBMS1	P29558	406 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	TIMP3	P35625	211 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RAB13	P51153	203 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CHN2	P52757	468 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ZP1	P60852	638 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ERVK11-1	P61568	191 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	VLDLR	P98155	873 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SRSF1	Q07955	248 aa	Known RBP eCLIP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RBBP4	Q09028	425 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	PJVK	Q0ZLH3	352 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	GK3P	Q14409	553 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	R3HDM1	Q15032	1099 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CRB2	Q5IJ48	1285 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ACSM5	Q6NUN0	579 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	GDPD4	Q6W3E5	623 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SERPINA9	Q86WD7	417 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	TMEM17	Q86X19	198 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	TGIF2LX	Q8IUE1	241 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	NAXD	Q8IW45	347 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	LAX1	Q8IWV1	398 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CMTM8	Q8IZV2	173 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	GABRG1	Q8N1C3	465 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	METTL4	Q8N3J2	472 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	LCORL	Q8N3X6	602 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CDYL2	Q8N8U2	506 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CHDH	Q8NE62	594 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	B3GNT7	Q8NFL0	401 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RNASE11	Q8TAA1	199 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	TMEM80	Q96HE8	168 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SENP5	Q96HI0	755 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CLIC6	Q96NY7	704 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	WFIKKN1	Q96NZ8	548 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	LRRC3B	Q96PB8	259 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	JMJD8	Q96S16	334 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	MTERF1	Q99551	399 aa	Known RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RBBP8	Q99708	897 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CMKLR1	Q99788	373 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SYT15	Q9BQS2	421 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	C2orf88	Q9BSF0	95 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	GPR174	Q9BXC1	333 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	CHRNA10	Q9GZZ6	450 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	MTHFD2L	Q9H903	347 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SYNPO2L	Q9H987	977 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SLC38A7	Q9NVC3	462 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SDHAF2	Q9NX18	166 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ANKRD10	Q9NXR5	420 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SLC2A8	Q9NY64	477 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	PRR13	Q9NZ81	148 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	ZNF282	Q9UDV7	671 aa	Predicted RBP	3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	STOML2	Q9UJZ1	356 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	SLC45A2	Q9UMX9	530 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	FLVCR2	Q9UPI3	526 aa		3.01	□□□□□ -1.93
TTC3-214	ENST00000472398	RAX	Q9Y2V3	346 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms