RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 ANKRD42Q8N9B4 389 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 FNDC5Q8NAU1 212 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 TMBIM1Q969X1 311 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 TUBGCP3Q96CW5 907 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 ZBED6CLQ96FA7 236 aaPredicted RBP12.96□□□□□ -0.33
TOP3B-215ENST00000470338 SLC35A4Q96G79 324 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 TMEM41AQ96HV5 264 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 ZNF597Q96LX8 424 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 RILPQ96NA2 401 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 NODALQ96S42 347 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
TOP3B-215ENST00000470338 ACKR4Q9NPB9 350 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 NTMQ9P121 344 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 MEMO1Q9Y316 297 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 HRH3Q9Y5N1 445 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 LIPGQ9Y5X9 500 aa12.96□□□□□ -0.33
TOP3B-215ENST00000470338 ARHGAP21Q5T5U3 1957 aa12.96□□□□□ -0.34
TOP3B-215ENST00000470338 PCNX3Q9H6A9 2034 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 A1L4Q6 167 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 OR14I1A6ND48 311 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 E9PLN8 166 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 AQP7O14520 342 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 SCAMP2O15127 329 aaKnown RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 HCN1O60741 890 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 ABCB7O75027 752 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 REM1O75628 298 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 ESRRAP11474 423 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 RPL3P39023 403 aaKnown RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 PTGDSP41222 190 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 PNLIPRP2P54317 469 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 MAD2L1Q13257 205 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 PTGR1Q14914 329 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 MLC1Q15049 377 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 PDCD2Q16342 344 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 SLC30A6Q6NXT4 461 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 SLC44A2Q8IWA5 706 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 RIMKLAQ8IXN7 391 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 OR4N2Q8NGD1 307 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 ZFP28Q8NHY6 868 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 PHF10Q8WUB8 498 aaKnown RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 ITLN2Q8WWU7 325 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 HOXB13Q92826 284 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 JSRP1Q96MG2 331 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 COL21A1Q96P44 957 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 DMRTA2Q96SC8 542 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 VKORC1Q9BQB6 163 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 C1orf50Q9BV19 199 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 UBQLN3Q9H347 655 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 AKTIPQ9H8T0 292 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 DDX18Q9NVP1 670 aaKnown RBP12.95□□□□□ -0.34
TOP3B-215ENST00000470338 ASIC5Q9NY37 505 aa12.95□□□□□ -0.34
TOP3B-215ENST00000470338 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 ICOSLGO75144 302 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 SNNO75324 88 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-215ENST00000470338 TPOP07202 933 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 PRPS1L1P21108 318 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 HPCAL1P37235 193 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 MAP3K8P41279 467 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 C21orf58P58505 322 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 ZNF155Q12901 538 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-215ENST00000470338 HSPB3Q12988 150 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 EFR3AQ14156 821 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 CYP27C1Q4G0S4 372 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 AGBL2Q5U5Z8 902 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 TIGD3Q6B0B8 471 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 RPTNQ6XPR3 784 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 CD163Q86VB7 1156 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 LRRC34Q8IZ02 419 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 EID3Q8N140 333 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 ZNF808Q8N4W9 903 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-215ENST00000470338 NATD1Q8N6N6 113 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 OR7A2PQ8NGA2 310 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 RNF138Q8WVD3 245 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 COQ8BQ96D53 544 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 TMCO6Q96DC7 493 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 GNRHR2Q96P88 292 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 ADOQ96SZ5 270 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 LMF2Q9BU23 707 aaKnown RBP12.94□□□□□ -0.34
TOP3B-215ENST00000470338 METTL7AQ9H8H3 244 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 PNPOQ9NVS9 261 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 THAP1Q9NVV9 213 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
TOP3B-215ENST00000470338 B4GALT7Q9UBV7 327 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 EIF3LQ9Y262 564 aaKnown RBP12.94□□□□□ -0.34
TOP3B-215ENST00000470338 CENPEQ02224 2701 aa12.94□□□□□ -0.34
TOP3B-215ENST00000470338 CELSR2Q9HCU4 2923 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 TRGV5A0A0B4J1U4 118 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 NPIPA2E9PIF3 369 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 NPIPA3F8WFD2 350 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 BCKDKO14874 412 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 HPNP05981 417 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 LAMP1P11279 417 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 G6PDP11413 515 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms