RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PLA2G10O15496 165 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 EMC8O43402 210 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 F3P13726 295 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 CTNNB1P35222 781 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 TSFMP43897 325 aaKnown RBP12.81□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF155Q12901 538 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-209ENST00000470026 TMEM44Q2T9K0 475 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.81□□□□□ -0.36
BRCA1-209ENST00000470026 SLC48A1Q6P1K1 146 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 OR8K5Q8NH50 307 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 OR52P1PQ8NH57 321 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 GATAD2BQ8WXI9 593 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 SUSD6Q92537 303 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 C1GALT1C1Q96EU7 318 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 C16orf58Q96GQ5 468 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 ZFYVE19Q96K21 471 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 C12orf66Q96MD2 445 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF681Q96N22 645 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 TIMM29Q9BSF4 260 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 YIPF4Q9BSR8 244 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 PRRG3Q9BZD7 231 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 ANKRA2Q9H9E1 313 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 SLC6A20Q9NP91 592 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 MED17Q9NVC6 651 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 IL20Q9NYY1 176 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 THAP10Q9P2Z0 257 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-209ENST00000470026 EXOGQ9Y2C4 368 aaKnown RBP12.81□□□□□ -0.36
BRCA1-209ENST00000470026 GSTK1Q9Y2Q3 226 aa12.81□□□□□ -0.36
BRCA1-209ENST00000470026 GPR55Q9Y2T6 319 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-209ENST00000470026 GLOD5A6NK44 160 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 B4DXG7 233 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 AIFM1O95831 613 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 IGHA1P01876 353 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CSNK2A2P19784 350 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 FPR3P25089 353 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PTBP1P26599 531 aaKnown RBP eCLIP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PRKAR1BP31321 381 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 SLC1A3P43003 542 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PRKAG1P54619 331 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 TAS2R41P59536 307 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PPP3R1P63098 170 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ABATP80404 500 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ST3GAL3Q11203 375 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 RIN1Q13671 783 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF750Q32MQ0 723 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CRTC2Q53ET0 693 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 GPAT3Q53EU6 434 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF311Q5JNZ3 666 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 AGBL4Q5VU57 503 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 METAP1DQ6UB28 335 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ADCK2Q7Z695 626 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 HMGN2P46Q86SG4 172 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CCDC116Q8IYX3 515 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 SYT14Q8NB59 555 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PSD4Q8NDX1 1056 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 OR2L5Q8NG80 312 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 SLC7A6Q92536 515 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ZC3HAV1LQ96H79 300 aaKnown RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 RNF170Q96K19 258 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 TM9SF2Q99805 663 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PPP1R3EQ9H7J1 279 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 MBNL1Q9NR56 388 aaKnown RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CTPS2Q9NRF8 586 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CALML5Q9NZT1 146 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PRKAG2Q9UGJ0 569 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 SURF4O15260 269 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ERI3O43414 337 aaKnown RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ERAL1O75616 437 aaKnown RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 LALBAP00709 142 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 SERPIND1P05546 499 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CD79BP40259 229 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 STAT5AP42229 794 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 PRR5P85299 388 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 CHRNEQ04844 493 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 TAB1Q15750 504 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 DECR1Q16698 335 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ZFP69Q49AA0 526 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 OR4Q3Q8NH05 313 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ELP4Q96EB1 424 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 GIMAP5Q96F15 307 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 DEPDC7Q96QD5 511 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 QRSL1Q9H0R6 528 aaKnown RBP12.8□□□□□ -0.36
BRCA1-209ENST00000470026 MMP28Q9H239 520 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 XKR8Q9H6D3 395 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF232Q9UNY5 417 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 GPR52Q9Y2T5 361 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 TRPM6Q9BX84 2022 aa12.8□□□□□ -0.36
BRCA1-209ENST00000470026 NUMA1Q14980 2115 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 LRRTM2O43300 516 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 HCN1O60741 890 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 TMCC2O75069 709 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 APOL3O95236 402 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 GALP22466 123 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 TRHRP34981 398 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 PTGER1P34995 402 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms