RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NAV2Q8IVL1 2488 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ANKUB1A6NFN9 424 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 VGLL3A8MV65 326 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ACOX3O15254 700 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ERI3O43414 337 aaKnown RBP16.39■□□□□ 0.21
MRPL28-208ENST00000469744 TNFAIP8O95379 198 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ETHE1O95571 254 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ANXA4P09525 319 aaPredicted RBP16.39■□□□□ 0.21
MRPL28-208ENST00000469744 LINGO3P0C6S8 592 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 RNH1P13489 461 aaKnown RBP16.39■□□□□ 0.21
MRPL28-208ENST00000469744 COX7A2P14406 83 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 TNFSF10P50591 281 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 STXBP1P61764 594 aaKnown RBP16.39■□□□□ 0.21
MRPL28-208ENST00000469744 NRF1Q16656 503 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 NHSL2Q5HYW2 709 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ERICH5Q6P6B1 374 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 CARM1Q86X55 608 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 EPHX4Q8IUS5 362 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 EID3Q8N140 333 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 CA13Q8N1Q1 262 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 VPS37AQ8NEZ2 397 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 FAM110BQ8TC76 370 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 GAL3ST3Q96A11 431 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 MS4A6EQ96DS6 147 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 PTCHD1Q96NR3 888 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 INPP5KQ9BT40 448 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 EBPLQ9BY08 206 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 ANKRD60Q9BZ19 345 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.39■□□□□ 0.21
MRPL28-208ENST00000469744 PIF1Q9H611 641 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
MRPL28-208ENST00000469744 POLEQ07864 2286 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 LRIT2A6NDA9 550 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 SOCS2O14508 198 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 CLOCKO15516 846 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 MAN1A2O60476 641 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 LRATO95237 230 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 TBX6O95947 436 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-208ENST00000469744 GPX2P18283 190 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 PLA2G16P53816 162 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 GTDC1Q4AE62 458 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 CPTPQ5TA50 214 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 NIPAL1Q6NVV3 410 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 R3HCC1LQ7Z5L2 792 aaKnown RBP16.38■□□□□ 0.21
MRPL28-208ENST00000469744 METTL4Q8N3J2 472 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 TTLQ8NG68 377 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.38■□□□□ 0.21
MRPL28-208ENST00000469744 HAS2Q92819 552 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 MTERF3Q96E29 417 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 RNF145Q96MT1 663 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 LPAR4Q99677 370 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 DUSP26Q9BV47 211 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 BHLHE41Q9C0J9 482 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-208ENST00000469744 DCAF13Q9NV06 445 aaKnown RBP16.38■□□□□ 0.21
MRPL28-208ENST00000469744 STMN3Q9NZ72 180 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 CORO2BQ9UQ03 480 aa16.38■□□□□ 0.21
MRPL28-208ENST00000469744 WBP11Q9Y2W2 641 aaKnown RBP16.38■□□□□ 0.21
MRPL28-208ENST00000469744 TRAV17A0A0B4J275 112 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 ARHGAP10A1A4S6 786 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 ANKDD1BA6NHY2 528 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 SAC3D1A6NKF1 404 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 PCDH7O60245 1069 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 PTX3P26022 381 aaPredicted RBP16.37■□□□□ 0.21
MRPL28-208ENST00000469744 CDKN2CP42773 168 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 ZNF763Q0D2J5 394 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 RUNX2Q13950 521 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 EXT1Q16394 746 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 FAM180AQ6UWF9 173 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 DNAJC14Q6Y2X3 702 aaPredicted RBP16.37■□□□□ 0.21
MRPL28-208ENST00000469744 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 CBR4Q8N4T8 237 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 OR7A2PQ8NGA2 310 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 FAR1Q8WVX9 515 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 FIG4Q92562 907 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 TFAP2CQ92754 450 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 FAM162AQ96A26 154 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 CNBD2Q96M20 576 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 PANX1Q96RD7 426 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 NECTIN3Q9NQS3 549 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 SLC6A13Q9NSD5 602 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 NDUFA13Q9P0J0 144 aa16.37■□□□□ 0.21
MRPL28-208ENST00000469744 RNF103-CHMP3A0A140T963 221 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 A8MUA0 341 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 CLIC1O00299 241 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 RNASET2O00584 256 aaKnown RBP16.36■□□□□ 0.21
MRPL28-208ENST00000469744 TPST1O60507 370 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 SH3BGRLO75368 114 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 CLEC3AO75596 197 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 SEMA3DO95025 777 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 SLC26A5P58743 744 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 ELOAQ14241 798 aaKnown RBP16.36■□□□□ 0.21
MRPL28-208ENST00000469744 ADRM1Q16186 407 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 ACER2Q5QJU3 275 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 QSOX2Q6ZRP7 698 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 GOT1L1Q8NHS2 421 aaPredicted RBP16.36■□□□□ 0.21
MRPL28-208ENST00000469744 M1APQ8TC57 530 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 PSMG3-AS1Q96PY0 264 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 TAAR6Q96RI8 345 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms