RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 OR1F1O43749 312 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 KERAO60938 352 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 CDH16O75309 829 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 KLHL2O95198 593 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ALPPP05187 535 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 RAB40ALP0C0E4 278 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PRKAR1AP10644 381 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ERGP11308 486 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 NEFHP12036 1026 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 CDH1P12830 882 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 FBLP22087 321 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 JAK1P23458 1154 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PSMB5P28074 263 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PTPN4P29074 926 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 IMPA1P29218 277 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 DEKP35659 375 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 RAP1GDS1P52306 607 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 GPX6P59796 221 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PPP1CAP62136 330 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 IRF8Q02556 426 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 RELAQ04206 551 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 CDC16Q13042 620 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ALKBH1Q13686 389 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 HERC3Q15034 1050 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 DAZAP2Q15038 168 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PHKG1Q16816 387 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 XKR6Q5GH73 641 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 CFAP157Q5JU67 520 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 WASHC2DQ5SRD0 308 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 KIAA1614Q5VZ46 1190 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 RHBDD2Q6NTF9 364 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 METTL2BQ6P1Q9 378 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 C19orf48Q6RUI8 117 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 TMPRSS11BQ86T26 416 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 TMEM200AQ86VY9 491 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 THOC6Q86W42 341 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 SLC22A9Q8IVM8 553 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 LINC01555Q8NAE3 123 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 OR2A1Q8NGT9 310 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 RHEBL1Q8TAI7 183 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 FAM110DQ8TAY7 271 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 BCAS4Q8TDM0 211 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ACMSDQ8TDX5 336 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 WIPF2Q8TF74 440 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 SLC13A3Q8WWT9 602 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 SLC5A11Q8WWX8 675 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 MMABQ96EY8 250 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 SLC45A3Q96JT2 553 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 MAELQ96JY0 434 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PKNOX2Q96KN3 472 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 FER1L6-AS2Q96M78 137 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ADAD1Q96M93 576 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PRAP1Q96NZ9 151 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 EFCAB11Q9BUY7 163 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ROGDIQ9GZN7 287 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ALG9Q9H6U8 611 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 CAB39LQ9H9S4 337 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 PELI2Q9HAT8 420 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF304Q9HCX3 659 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 APMAPQ9HDC9 416 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 C14orf105Q9NVL8 296 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 THAP1Q9NVV9 213 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 NMRK1Q9NWW6 199 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 GALPQ9UBC7 116 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF282Q9UDV7 671 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 C19orf25Q9UFG5 118 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 DCDC2Q9UHG0 476 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 FARSAQ9Y285 508 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 MRPS33Q9Y291 106 aaKnown RBP5.86□□□□□ -1.47
PTCD3-208ENST00000469585 DTX4Q9Y2E6 619 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 NCOR2Q9Y618 2525 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 TRBC2A0A5B9 178 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 ARHGAP10A1A4S6 786 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 OR2A25A4D2G3 310 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 TRIM49D1C9J1S8 452 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 K7ENP7 123 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 CDC7O00311 574 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 COPEO14579 308 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 TP73O15350 636 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 NDUFS4O43181 175 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 TLX3O43711 291 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-208ENST00000469585 GLRA3O75311 464 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 CREG1O75629 220 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 C2P06681 752 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 HEXBP07686 556 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 CELA2AP08217 269 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 GSTA1P08263 222 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 PCNAP12004 261 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 LIFP15018 202 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 CD1DP15813 335 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 HOXB9P17482 250 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-208ENST00000469585 IL10P22301 178 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 ATP5F1P24539 256 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-208ENST00000469585 AHRP35869 848 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 CCNG1P51959 295 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 MVDP53602 400 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 CDC20Q12834 499 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 ERV3-1Q14264 604 aa5.85□□□□□ -1.47
PTCD3-208ENST00000469585 FASTKQ14296 549 aaKnown RBP5.85□□□□□ -1.47
PTCD3-208ENST00000469585 EFTUD2Q15029 972 aaKnown RBP eCLIP5.85□□□□□ -1.475e-10■■■■□ 21.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms