RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 OR10H5Q8NGA6 315 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 OR5M1Q8NGP8 315 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 OR1J4Q8NGS1 313 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ADIPOR1Q96A54 375 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ESAMQ96AP7 390 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FBXL8Q96CD0 374 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 IQCDQ96DY2 449 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SERINC2Q96SA4 455 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 AIF1LQ9BQI0 150 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SOX7Q9BT81 388 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 NTMT1Q9BV86 223 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 OR2B2Q9GZK3 357 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 IL22Q9GZX6 179 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SHARPINQ9H0F6 387 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 MANSC1Q9H8J5 431 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CHODLQ9H9P2 273 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 INTS10Q9NVR2 710 aaKnown RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 WWOXQ9NZC7 414 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 EHD3Q9NZN3 535 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 BFARQ9NZS9 450 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 KLHL42Q9P2K6 505 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 COPS7AQ9UBW8 275 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FETUBQ9UGM5 382 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FBXL7Q9UJT9 491 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FBXL2Q9UKC9 423 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FBXO5Q9UKT4 447 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CLEC4AQ9UMR7 237 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 NOTCH1P46531 2555 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 GOLGA6L9A6NEM1 432 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 GLOD5A6NK44 160 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 GSTA4O15217 222 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 CLOCKO15516 846 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ZIC3O60481 467 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 RAMP1O60894 148 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 LY6HO94772 140 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 AQP8O94778 261 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 SNX4O95219 450 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 VENTXO95231 258 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 RNASE1P07998 156 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 C1GALT1C1LP0DN25 315 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 SRD5A1P18405 259 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 CPN2P22792 545 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ATP5A1P25705 553 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 CNTFP26441 200 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 STIP1P31948 543 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 THBS2P35442 1172 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 SLC6A12P48065 614 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 HNRNPH2P55795 449 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 IRX1P78414 480 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 BASP1P80723 227 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 VLDLRP98155 873 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 MVKQ03426 396 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 GAB1Q13480 694 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 SERTAD2Q14140 314 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 DHX34Q14147 1143 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 RPS6KA2Q15349 733 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 GUSBP1Q15486 140 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TRIP13Q15645 432 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 CTU2Q2VPK5 515 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 KBTBD12Q3ZCT8 623 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 HSP90AA5PQ58FG0 334 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 HIST2H2BDQ6DRA6 164 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TMIGD1Q6UXZ0 262 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 C12orf54Q6X4T0 127 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 P4HA3Q7Z4N8 544 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 MEX3DQ86XN8 651 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 VSTM4Q8IW00 320 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF619Q8N2I2 560 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF525Q8N782 197 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ACOT4Q8N9L9 421 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 BBOF1Q8ND07 529 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 KBTBD8Q8NFY9 601 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 OR14L1PQ8NHC6 308 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 FNDC9Q8TBE3 224 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 SMAP2Q8WU79 429 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 HGDQ93099 445 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TRMT61AQ96FX7 289 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TMEM41AQ96HV5 264 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 FBXL20Q96IG2 436 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ZFP3Q96NJ6 502 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 DGAT2Q96PD7 388 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TRAF4Q9BUZ4 470 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 NXF5Q9H1B4 397 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 CCDC68Q9H2F9 335 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 EML4Q9HC35 981 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 IARS2Q9NSE4 1012 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TMEM160Q9NX00 188 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 ELOVL5Q9NYP7 299 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 MOCS1Q9NZB8 636 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TRMT6Q9UJA5 497 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 MRPS33Q9Y291 106 aaKnown RBP4.72□□□□□ -1.65
PTPN4-209ENST00000469511 B3GALT5Q9Y2C3 310 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 TRRAPQ9Y4A5 3859 aa4.72□□□□□ -1.65
PTPN4-209ENST00000469511 NBEAL2Q6ZNJ1 2754 aa4.71□□□□□ -1.65
PTPN4-209ENST00000469511 PRKDCP78527 4128 aaKnown RBP4.71□□□□□ -1.65
PTPN4-209ENST00000469511 hCG_2014768A0A024R1R8 64 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 IQANK1A0A1B0GTG1 560 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 C2orf92A0A1B0GVN3 265 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 SYCE3A1L190 88 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms