RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SUPT3HB4E1H0 165 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 H0YC42 278 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 ABCB7O75027 752 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 SUPT3HO75486 399 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBR4-211ENST00000467272 LTA4HP09960 611 aaKnown RBP10.97□□□□□ -0.65
UBR4-211ENST00000467272 POU2F1P14859 743 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 KRT15P19012 456 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 IL11P20809 199 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 NT5EP21589 574 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 CRABP2P29373 138 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 ALDH18A1P54886 795 aaKnown RBP10.97□□□□□ -0.65
UBR4-211ENST00000467272 TPD52P55327 224 aaPredicted RBP10.97□□□□□ -0.65
UBR4-211ENST00000467272 GALNT1Q10472 559 aaPredicted RBP10.97□□□□□ -0.65
UBR4-211ENST00000467272 TMEM44Q2T9K0 475 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 KBTBD12Q3ZCT8 623 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 ADAM5Q6NVV9 412 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 GOLGA7Q7Z5G4 137 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 METTL4Q8N3J2 472 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 OR52R1Q8NGF1 315 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 LILRB1Q8NHL6 650 aaPredicted RBP10.97□□□□□ -0.65
UBR4-211ENST00000467272 RDH11Q8TC12 318 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 ZNF675Q8TD23 568 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 TMBIM1Q969X1 311 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 TM4SF18Q96CE8 201 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 NXNL1Q96CM4 212 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 CNRIP1Q96F85 164 aaPredicted RBP10.97□□□□□ -0.65
UBR4-211ENST00000467272 VSTM2LQ96N03 204 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 SFXN2Q96NB2 322 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 IPPKQ9H8X2 491 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 PLSCR4Q9NRQ2 329 aa10.97□□□□□ -0.65
UBR4-211ENST00000467272 C1orf226A1L170 272 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 PLAUP00749 431 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 KLK1P06870 262 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 PEPDP12955 493 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 NID1P14543 1247 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 PCSK2P16519 638 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 CSNK2A2P19784 350 aaPredicted RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 TBXA2RP21731 343 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 GRK2P25098 689 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 DPP4P27487 766 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 SPRP35270 261 aaPredicted RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 DSCR4P56555 118 aaPredicted RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 PHEXP78562 749 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 GTF2H2Q13888 395 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 FGFBP1Q14512 234 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 ZNF628Q5EBL2 1059 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 BEX5Q5H9J7 111 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 C10orf62Q5T681 223 aaPredicted RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 GRTP1Q5TC63 336 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 GTF2H2CQ6P1K8 395 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 NPSR1Q6W5P4 371 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 STAC2Q6ZMT1 411 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 HIPK1Q86Z02 1210 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 METTL25Q8N6Q8 603 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 CNEP1R1Q8N9A8 125 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 OR52B6Q8NGF0 335 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 FNDC9Q8TBE3 224 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 TMCO6Q96DC7 493 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 ERP27Q96DN0 273 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 ZNF845Q96IR2 970 aaPredicted RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 FAM111AQ96PZ2 611 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 NTMT1Q9BV86 223 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 MRPL1Q9BYD6 325 aaKnown RBP10.96□□□□□ -0.65
UBR4-211ENST00000467272 WHRNQ9P202 907 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 ZNF337Q9Y3M9 751 aa10.96□□□□□ -0.65
UBR4-211ENST00000467272 MEGF8Q7Z7M0 2845 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 SYCE1LA8MT33 242 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 HS3ST1O14792 307 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 EIF3HO15372 352 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBR4-211ENST00000467272 FADS1O60427 444 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 SIX3O95343 332 aaPredicted RBP10.95□□□□□ -0.66
UBR4-211ENST00000467272 CLDN9O95484 217 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 GSTA2P09210 222 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 DANCRP0C864 163 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 PPP3CBP16298 524 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 FEN1P39748 380 aaKnown RBP10.95□□□□□ -0.66
UBR4-211ENST00000467272 PIK3CGP48736 1102 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 PNLIPRP2P54317 469 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 CORO7P57737 925 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 PSPHP78330 225 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 MRPS35P82673 323 aaKnown RBP10.95□□□□□ -0.66
UBR4-211ENST00000467272 IRF9Q00978 393 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 DMTNQ08495 405 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 TRAF3Q13114 568 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 LTB4RQ15722 352 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 PFKFB4Q16877 469 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBR4-211ENST00000467272 GGTA1PQ4G0N0 100 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 CCNYL2Q5T2Q4 361 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 FRG2Q64ET8 278 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 OR5M10Q6IEU7 315 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 FAM214BQ7L5A3 538 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 COMMD6Q7Z4G1 85 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 MYLK4Q86YV6 388 aaPredicted RBP10.95□□□□□ -0.66
UBR4-211ENST00000467272 KLHL7Q8IXQ5 586 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 ADCY4Q8NFM4 1077 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 OR2M3Q8NG83 312 aa10.95□□□□□ -0.66
UBR4-211ENST00000467272 PYROXD1Q8WU10 500 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms