RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 RIPPLY3P57055 190 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 NAA20P61599 178 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 DUSP2Q05923 314 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 ZNF763Q0D2J5 394 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 ZNHIT3Q15649 155 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-206ENST00000466591 NHSL2Q5HYW2 709 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 FNDC7Q5VTL7 733 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 FAM219BQ5XKK7 198 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 P4HA3Q7Z4N8 544 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 PLCZ1Q86YW0 608 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 SLC44A2Q8IWA5 706 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-206ENST00000466591 TMEM151AQ8N4L1 468 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 RELL2Q8NC24 303 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-206ENST00000466591 NAXEQ8NCW5 288 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 SIMC1Q8NDZ2 872 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 HGDQ93099 445 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 CTHRC1Q96CG8 243 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 WDYHV1Q96HA8 205 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 ZNF681Q96N22 645 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 TM9SF2Q99805 663 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 STMN4Q9H169 189 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-206ENST00000466591 ANKRA2Q9H9E1 313 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 CALHM2Q9HA72 323 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 MRTO4Q9UKD2 239 aaKnown RBP15.97■□□□□ 0.15
COL7A1-206ENST00000466591 GPR55Q9Y2T6 319 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-206ENST00000466591 WIF1Q9Y5W5 379 aa15.97■□□□□ 0.15
COL7A1-206ENST00000466591 UQCRHLA0A096LP55 91 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 H3BQF6 201 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 DNASE1P24855 282 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 TACR1P25103 407 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 GCAP28676 217 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 DNAJA1P31689 397 aaKnown RBP15.96■□□□□ 0.15
COL7A1-206ENST00000466591 CEACAM8P31997 349 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-206ENST00000466591 RFX3P48380 749 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 CORO7P57737 925 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 DCST1Q5T197 706 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 TMEM81Q6P7N7 255 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 SEM1Q6ZVN7 128 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 TRIM42Q8IWZ5 723 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 FAM222BQ8WU58 562 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 NRGNQ92686 78 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 EFHD2Q96C19 240 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-206ENST00000466591 BTBD9Q96Q07 612 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 YIPF4Q9BSR8 244 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 IQCGQ9H095 443 aaKnown RBP15.96■□□□□ 0.15
COL7A1-206ENST00000466591 ACBD3Q9H3P7 528 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 FOLH1BQ9HBA9 442 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 RRAGDQ9NQL2 400 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-206ENST00000466591 DDX18Q9NVP1 670 aaKnown RBP15.96■□□□□ 0.15
COL7A1-206ENST00000466591 PPP4R1LQ9P1A2 415 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 FETUBQ9UGM5 382 aa15.96■□□□□ 0.15
COL7A1-206ENST00000466591 KDM4EB2RXH2 506 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-206ENST00000466591 TO15178 435 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 SCO2O43819 266 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 CTAG2O75638 210 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 JUNP05412 331 aaKnown RBP15.95■□□□□ 0.14
COL7A1-206ENST00000466591 DDCP20711 480 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 SLCO1A2P46721 670 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 ZNF136P52737 540 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 RAE1P78406 368 aaKnown RBP15.95■□□□□ 0.14
COL7A1-206ENST00000466591 CCDC153Q494R4 210 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 OR5M10Q6IEU7 315 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 ZYG11AQ6WRX3 759 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 SPNS3Q6ZMD2 512 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 GRAMD2AQ8IUY3 354 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 CHDHQ8NE62 594 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-206ENST00000466591 ZPLD1Q8TCW7 415 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 SDHAF3Q9NRP4 125 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 GRID1Q9ULK0 1009 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 RPH3AQ9Y2J0 694 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-206ENST00000466591 POLR3HQ9Y535 204 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-206ENST00000466591 CSMD2Q7Z408 3487 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 ARHGAP21Q5T5U3 1957 aa15.95■□□□□ 0.14
COL7A1-206ENST00000466591 ANKRD17O75179 2603 aaKnown RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 MBD3L4A6NDZ8 208 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 MBD3L3A6NE82 208 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 MBD3L5A6NJ08 208 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 COPEO14579 308 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 NME6O75414 186 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 FAM153BP0C7A2 387 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 SRD5A2P31213 254 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 GPC1P35052 558 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 PNLIPRP2P54317 469 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 PSMD4P55036 377 aaKnown RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 PPP2R2AP63151 447 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 STX5Q13190 355 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 DECR1Q16698 335 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 FAM153CQ494X1 144 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 RAET1LQ5VY80 246 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 TMEM107Q6UX40 140 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 SZRD1Q7Z422 152 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 LUZP2Q86TE4 346 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 GSPT2Q8IYD1 628 aaKnown RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 MBD3L2Q8NHZ7 208 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-206ENST00000466591 SLC35A4Q96G79 324 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 TUBA1CQ9BQE3 449 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 OR2B2Q9GZK3 357 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 GSTO2Q9H4Y5 243 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 C3orf14Q9HBI5 128 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 Q9N2J8 555 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms