RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 C1orf185Q5T7R7 199 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 ANKRD26P1Q6NSI1 321 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 TMEM107Q6UX40 140 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 ANGPTL8Q6UXH0 198 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 RNF165Q6ZSG1 346 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 ACAD11Q709F0 780 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 ASB5Q8WWX0 329 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 GFM2Q969S9 779 aaKnown RBP19.89■□□□□ 0.77
LIME1-203ENST00000465591 OSBPL11Q9BXB4 747 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 PARD6BQ9BYG5 372 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 PCNX3Q9H6A9 2034 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 SLC6A5Q9Y345 797 aa19.89■□□□□ 0.77
LIME1-203ENST00000465591 POLQO75417 2590 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 A0A0G2JNJ9 132 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 SNPHO15079 494 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 NPHS1O60500 1241 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 WDR1O75083 606 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 REM1O75628 298 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 SDC1P18827 310 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 TFF3Q07654 80 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 RFTN2Q52LD8 501 aaPredicted RBP19.88■□□□□ 0.77
LIME1-203ENST00000465591 ZNF385BQ569K4 471 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 SEM1Q6ZVN7 128 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 IKBIPQ70UQ0 350 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 ULK2Q8IYT8 1036 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 LIX1Q8N485 282 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 MREGQ8N565 214 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 WDSUB1Q8N9V3 476 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 SLC35A4Q96G79 324 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 METTL2AQ96IZ6 378 aaKnown RBP19.88■□□□□ 0.77
LIME1-203ENST00000465591 AMDHD1Q96NU7 426 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 COL21A1Q96P44 957 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 ADOQ96SZ5 270 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 TMEM109Q9BVC6 243 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 ENKD1Q9H0I2 346 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 NPDC1Q9NQX5 325 aaPredicted RBP19.88■□□□□ 0.77
LIME1-203ENST00000465591 SENP1Q9P0U3 644 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 Q9UFV3 132 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 GIMAP2Q9UG22 337 aa19.88■□□□□ 0.77
LIME1-203ENST00000465591 WBP11Q9Y2W2 641 aaKnown RBP19.88■□□□□ 0.77
LIME1-203ENST00000465591 C15orf38-AP3S2A0A0A6YYH1 394 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 PRAMEF25A6NGN4 478 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 OR6C70A6NIJ9 312 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 C17orf51A8MQB3 221 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 B4DXG7 233 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 UPK1AO00322 258 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 LSM1O15116 133 aaKnown RBP19.87■□□□□ 0.77
LIME1-203ENST00000465591 RGS14O43566 566 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 TYROBPO43914 113 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 TOXO94900 526 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 FGF4P08620 206 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 PTGER4P35408 488 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 PSG6Q00889 435 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 WIPI1Q5MNZ9 446 aaPredicted RBP19.87■□□□□ 0.77
LIME1-203ENST00000465591 DCST1Q5T197 706 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 SLC30A6Q6NXT4 461 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 WDR53Q7Z5U6 358 aaPredicted RBP19.87■□□□□ 0.77
LIME1-203ENST00000465591 LIX1LQ8IVB5 337 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 SLC44A2Q8IWA5 706 aaPredicted RBP19.87■□□□□ 0.77
LIME1-203ENST00000465591 OR10Q1Q8NGQ4 319 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 OR1J4Q8NGS1 313 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 CLHC1Q8NHS4 586 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 AGR3Q8TD06 166 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 TWIST2Q8WVJ9 160 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 TIMP4Q99727 224 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 SERHLQ9NQF3 203 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 KLRF1Q9NZS2 232 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 BAIAP2L1Q9UHR4 511 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 C19orf53Q9UNZ5 99 aaPredicted RBP19.87■□□□□ 0.77
LIME1-203ENST00000465591 MAPRE3Q9UPY8 281 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 TRAF6Q9Y4K3 522 aa19.87■□□□□ 0.77
LIME1-203ENST00000465591 A0A087WV62 115 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 PLOD2O00469 737 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 PIP5K1BO14986 540 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 AKAP10O43572 662 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 PSMG1O95456 288 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 ELAVL4P26378 380 aaKnown RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 NTSP30990 170 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 ETV4P43268 484 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 WNT3P56703 355 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 RPL38P63173 70 aaKnown RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 ZNF844Q08AG5 666 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 ZNF155Q12901 538 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 SNTA1Q13424 505 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 CES4AQ5XG92 561 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 ZNF551Q7Z340 670 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 YRDCQ86U90 279 aaKnown RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 LURAP1LQ8IV03 231 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 FAM83FQ8NEG4 500 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 OR6Y1Q8NGX8 325 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 RNF138Q8WVD3 245 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 CIDECQ96AQ7 238 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 ZBTB9Q96C00 473 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 EFHD2Q96C19 240 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 ELP4Q96EB1 424 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 TSSK3Q96PN8 268 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 CCT7Q99832 543 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 TREX2Q9BQ50 279 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 STMN4Q9H169 189 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 TAS2R9Q9NYW1 312 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms