RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 APRTP07741 180 aa8.37□□□□□ -1.07
APP-213ENST00000464867 PSMB1P20618 241 aaKnown RBP8.37□□□□□ -1.07
APP-213ENST00000464867 FUT4P22083 530 aa8.37□□□□□ -1.07
APP-213ENST00000464867 CPN2P22792 545 aa8.37□□□□□ -1.07
APP-213ENST00000464867 IL32P24001 234 aa8.37□□□□□ -1.07
APP-213ENST00000464867 PTPN7P35236 360 aa8.37□□□□□ -1.07
APP-213ENST00000464867 PDLIM4P50479 330 aa8.37□□□□□ -1.07
APP-213ENST00000464867 CDH11P55287 796 aa8.37□□□□□ -1.07
APP-213ENST00000464867 AP1S2P56377 157 aa8.37□□□□□ -1.07
APP-213ENST00000464867 SLC37A1P57057 533 aa8.37□□□□□ -1.07
APP-213ENST00000464867 C21orf58P58505 322 aa8.37□□□□□ -1.07
APP-213ENST00000464867 RPS3AP61247 264 aaKnown RBP8.37□□□□□ -1.07
APP-213ENST00000464867 CRADDP78560 199 aa8.37□□□□□ -1.07
APP-213ENST00000464867 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
APP-213ENST00000464867 PON3Q15166 354 aa8.37□□□□□ -1.07
APP-213ENST00000464867 SGCBQ16585 318 aa8.37□□□□□ -1.07
APP-213ENST00000464867 CTU2Q2VPK5 515 aaKnown RBP8.37□□□□□ -1.07
APP-213ENST00000464867 PPP4R4Q6NUP7 873 aa8.37□□□□□ -1.07
APP-213ENST00000464867 TMIGD1Q6UXZ0 262 aa8.37□□□□□ -1.07
APP-213ENST00000464867 NUP54Q7Z3B4 507 aa8.37□□□□□ -1.07
APP-213ENST00000464867 CTAGE6Q86UF2 777 aa8.37□□□□□ -1.07
APP-213ENST00000464867 OR4N5Q8IXE1 308 aa8.37□□□□□ -1.07
APP-213ENST00000464867 FBXL14Q8N1E6 418 aa8.37□□□□□ -1.07
APP-213ENST00000464867 MYO1HQ8N1T3 1032 aa8.37□□□□□ -1.07
APP-213ENST00000464867 ZNF540Q8NDQ6 660 aa8.37□□□□□ -1.07
APP-213ENST00000464867 FNDC9Q8TBE3 224 aa8.37□□□□□ -1.07
APP-213ENST00000464867 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
APP-213ENST00000464867 RIT1Q92963 219 aa8.37□□□□□ -1.07
APP-213ENST00000464867 GFM2Q969S9 779 aaKnown RBP8.37□□□□□ -1.07
APP-213ENST00000464867 MRPL24Q96A35 216 aaKnown RBP8.37□□□□□ -1.07
APP-213ENST00000464867 RADILQ96JH8 1075 aa8.37□□□□□ -1.07
APP-213ENST00000464867 AICDAQ9GZX7 198 aa8.37□□□□□ -1.07
APP-213ENST00000464867 METTL17Q9H7H0 456 aaPredicted RBP8.37□□□□□ -1.07
APP-213ENST00000464867 PCDHB10Q9UN67 800 aa8.37□□□□□ -1.07
APP-213ENST00000464867 COMMD10Q9Y6G5 202 aa8.37□□□□□ -1.07
APP-213ENST00000464867 EPN1Q9Y6I3 576 aaPredicted RBP8.37□□□□□ -1.07
APP-213ENST00000464867 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
APP-213ENST00000464867 FGF17O60258 216 aa8.36□□□□□ -1.07
APP-213ENST00000464867 CLEC3AO75596 197 aa8.36□□□□□ -1.07
APP-213ENST00000464867 ABCB1P08183 1280 aaPredicted RBP8.36□□□□□ -1.07
APP-213ENST00000464867 ALOX15P16050 662 aaPredicted RBP8.36□□□□□ -1.07
APP-213ENST00000464867 NAGAP17050 411 aa8.36□□□□□ -1.07
APP-213ENST00000464867 TCEA1P23193 301 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 TTKP33981 857 aa8.36□□□□□ -1.07
APP-213ENST00000464867 NR4A2P43354 598 aa8.36□□□□□ -1.07
APP-213ENST00000464867 KCNC1P48547 511 aa8.36□□□□□ -1.07
APP-213ENST00000464867 NPY2RP49146 381 aa8.36□□□□□ -1.07
APP-213ENST00000464867 ZNF844Q08AG5 666 aa8.36□□□□□ -1.07
APP-213ENST00000464867 FOXL1Q12952 345 aa8.36□□□□□ -1.07
APP-213ENST00000464867 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
APP-213ENST00000464867 NEPROQ6NW34 567 aa8.36□□□□□ -1.07
APP-213ENST00000464867 TMEM81Q6P7N7 255 aa8.36□□□□□ -1.07
APP-213ENST00000464867 CENPUQ71F23 418 aa8.36□□□□□ -1.07
APP-213ENST00000464867 EXOC3L1Q86VI1 746 aa8.36□□□□□ -1.07
APP-213ENST00000464867 THOC6Q86W42 341 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 CCDC25Q86WR0 208 aa8.36□□□□□ -1.07
APP-213ENST00000464867 PLCZ1Q86YW0 608 aa8.36□□□□□ -1.07
APP-213ENST00000464867 PRR22Q8IZ63 422 aa8.36□□□□□ -1.07
APP-213ENST00000464867 ST13P4Q8IZP2 240 aaPredicted RBP8.36□□□□□ -1.07
APP-213ENST00000464867 KRT78Q8N1N4 520 aa8.36□□□□□ -1.07
APP-213ENST00000464867 MUC15Q8N387 334 aa8.36□□□□□ -1.07
APP-213ENST00000464867 SRFBP1Q8NEF9 429 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
APP-213ENST00000464867 EEF1AKMT1Q8WVE0 214 aa8.36□□□□□ -1.07
APP-213ENST00000464867 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
APP-213ENST00000464867 KCNC2Q96PR1 638 aa8.36□□□□□ -1.07
APP-213ENST00000464867 GOLPH3Q9H4A6 298 aa8.36□□□□□ -1.07
APP-213ENST00000464867 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 TRMT6Q9UJA5 497 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 POU2F3Q9UKI9 436 aa8.36□□□□□ -1.07
APP-213ENST00000464867 WBP11Q9Y2W2 641 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 MRPS18CQ9Y3D5 142 aaKnown RBP8.36□□□□□ -1.07
APP-213ENST00000464867 PMF1-BGLAPU3KQ54 211 aa8.36□□□□□ -1.07
APP-213ENST00000464867 H7C417 338 aa8.35□□□□□ -1.07
APP-213ENST00000464867 SEC14L5O43304 696 aa8.35□□□□□ -1.07
APP-213ENST00000464867 RAMP1O60894 148 aa8.35□□□□□ -1.07
APP-213ENST00000464867 PPM1BO75688 479 aa8.35□□□□□ -1.07
APP-213ENST00000464867 GUCA1CO95843 209 aa8.35□□□□□ -1.07
APP-213ENST00000464867 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
APP-213ENST00000464867 ZNF23P17027 643 aa8.35□□□□□ -1.07
APP-213ENST00000464867 IL11P20809 199 aa8.35□□□□□ -1.07
APP-213ENST00000464867 ABCD3P28288 659 aa8.35□□□□□ -1.07
APP-213ENST00000464867 TLX1P31314 330 aaPredicted RBP8.35□□□□□ -1.07
APP-213ENST00000464867 STIP1P31948 543 aaKnown RBP8.35□□□□□ -1.07
APP-213ENST00000464867 IGLV3-21P80748 117 aaPredicted RBP8.35□□□□□ -1.07
APP-213ENST00000464867 IRF9Q00978 393 aa8.35□□□□□ -1.07
APP-213ENST00000464867 CHRNB3Q05901 458 aa8.35□□□□□ -1.07
APP-213ENST00000464867 THOC5Q13769 683 aaKnown RBP8.35□□□□□ -1.07
APP-213ENST00000464867 GUSBP1Q15486 140 aa8.35□□□□□ -1.07
APP-213ENST00000464867 TAB1Q15750 504 aa8.35□□□□□ -1.07
APP-213ENST00000464867 CARTPTQ16568 116 aa8.35□□□□□ -1.07
APP-213ENST00000464867 DEPDC1Q5TB30 811 aa8.35□□□□□ -1.07
APP-213ENST00000464867 SHQ1Q6PI26 577 aaKnown RBP8.35□□□□□ -1.07
APP-213ENST00000464867 UGT2A3Q6UWM9 527 aa8.35□□□□□ -1.07
APP-213ENST00000464867 RINLQ6ZS11 566 aa8.35□□□□□ -1.07
APP-213ENST00000464867 ZNF619Q8N2I2 560 aa8.35□□□□□ -1.07
APP-213ENST00000464867 WDSUB1Q8N9V3 476 aa8.35□□□□□ -1.07
APP-213ENST00000464867 BBOF1Q8ND07 529 aa8.35□□□□□ -1.07
APP-213ENST00000464867 PIWIL2Q8TC59 973 aaKnown RBP8.35□□□□□ -1.07
APP-213ENST00000464867 DOK4Q8TEW6 326 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms