RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 FBXO34Q9NWN3 711 aa14.35□□□□□ -0.11
GYPC-205ENST00000464053 PCDHGA8Q9Y5G5 932 aa14.35□□□□□ -0.11
GYPC-205ENST00000464053 GPC6Q9Y625 555 aaPredicted RBP14.35□□□□□ -0.11
GYPC-205ENST00000464053 CLCA3PQ9Y6N3 262 aa14.35□□□□□ -0.11
GYPC-205ENST00000464053 PRAMEF25A6NGN4 478 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 C9orf172C9J069 976 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 PRKNO60260 465 aaPredicted RBP14.34□□□□□ -0.11
GYPC-205ENST00000464053 PRAMEF2O60811 474 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ALOX12BO75342 701 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 NKX2-2O95096 273 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 SLC5A2P31639 672 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 LIMK1P53667 647 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 SLC37A1P57057 533 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ARHGAP11BQ3KRB8 267 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 C3orf38Q5JPI3 329 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 NPSR1Q6W5P4 371 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ANKRD37Q7Z713 158 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 MARCH9Q86YJ5 346 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 OR4N2Q8NGD1 307 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 BBS10Q8TAM1 723 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 FBXL20Q96IG2 436 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 DUSP22Q9NRW4 184 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 C3orf18Q9UK00 162 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ZNF451Q9Y4E5 1061 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 KNTC1P50748 2209 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 A0A0G2JPF8 293 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 HNRNPCL2B2RXH8 293 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 HNRNPCL3B7ZW38 293 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 AGR2O95994 175 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 IGKV3-11P04433 115 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 HNRNPCL4P0DMR1 293 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 CD247P20963 164 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 VHLP40337 213 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 MAGEA2P43356 314 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 EMP2P54851 167 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 VLDLRP98155 873 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ELOAQ14241 798 aaKnown RBP14.34□□□□□ -0.11
GYPC-205ENST00000464053 ATP6AP1Q15904 470 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 FRRS1Q6ZNA5 592 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 TIPARPQ7Z3E1 657 aaKnown RBP14.34□□□□□ -0.11
GYPC-205ENST00000464053 ZDHHC21Q8IVQ6 265 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 COX18Q8N8Q8 333 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 GPR32P1Q8NGA4 272 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 POP5Q969H6 163 aaKnown RBP14.34□□□□□ -0.11
GYPC-205ENST00000464053 ZNF607Q96SK3 696 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 SDF2Q99470 211 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 DDA1Q9BW61 102 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 NUDT9Q9BW91 350 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ITPAQ9BY32 194 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 ABCG2Q9UNQ0 655 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 SATB2Q9UPW6 733 aa14.34□□□□□ -0.11
GYPC-205ENST00000464053 GVINP1Q7Z2Y8 2422 aa14.33□□□□□ -0.11
GYPC-205ENST00000464053 DSPPQ9NZW4 1301 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 NINQ8N4C6 2090 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 hCG_2039718K7EN88 272 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 TM4SF5O14894 197 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 CLOCKO15516 846 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 PDE9AO76083 593 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 IFNA14P01570 189 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 FCGR1AP12314 374 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 OR1E2P47887 323 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 TARDBPQ13148 414 aaKnown RBP eCLIP14.33□□□□□ -0.124e-9■■■■■ 28.5
GYPC-205ENST00000464053 GNA13Q14344 377 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 NNATQ16517 81 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 IQCCQ4KMZ1 466 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 SFT2D3Q587I9 215 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 DCST2Q5T1A1 773 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 OGFRL1Q5TC84 451 aaPredicted RBP14.33□□□□□ -0.12
GYPC-205ENST00000464053 TYW3Q6IPR3 259 aaKnown RBP14.33□□□□□ -0.12
GYPC-205ENST00000464053 TSEN54Q7Z6J9 526 aaKnown RBP14.33□□□□□ -0.12
GYPC-205ENST00000464053 COMTD1Q86VU5 262 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 ARMC8Q8IUR7 673 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 KBTBD2Q8IY47 623 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 ICA1LQ8NDH6 482 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 CHDHQ8NE62 594 aaPredicted RBP14.33□□□□□ -0.12
GYPC-205ENST00000464053 OR7G1Q8NGA0 311 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 C7orf34Q96L11 122 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 ZPBPQ9BS86 351 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 CRB3Q9BUF7 120 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 SPRY4Q9C004 299 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 WDR54Q9H977 334 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 NTN4Q9HB63 628 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 IL1RAPQ9NPH3 570 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 FOXJ2Q9P0K8 574 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 GPN3Q9UHW5 284 aaPredicted RBP14.33□□□□□ -0.12
GYPC-205ENST00000464053 MKLN1Q9UL63 735 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 AK5Q9Y6K8 562 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 SDK2Q58EX2 2172 aa14.33□□□□□ -0.12
GYPC-205ENST00000464053 DIRAS1O95057 198 aa14.32□□□□□ -0.12
GYPC-205ENST00000464053 CAPNS1P04632 268 aa14.32□□□□□ -0.12
GYPC-205ENST00000464053 CT45A8P0DMV1 189 aa14.32□□□□□ -0.12
GYPC-205ENST00000464053 CT45A9P0DMV2 189 aa14.32□□□□□ -0.12
GYPC-205ENST00000464053 CDK4P11802 303 aa14.32□□□□□ -0.12
GYPC-205ENST00000464053 ETS2P15036 469 aa14.32□□□□□ -0.12
GYPC-205ENST00000464053 POU6F2P78424 691 aaPredicted RBP14.32□□□□□ -0.12
GYPC-205ENST00000464053 EIF3IQ13347 325 aaKnown RBP14.32□□□□□ -0.12
GYPC-205ENST00000464053 CT45A2Q5DJT8 189 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms