RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FAM219BQ5XKK7 198 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 ENPP6Q6UWR7 440 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 YRDCQ86U90 279 aaKnown RBP13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 PLCZ1Q86YW0 608 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 MZB1Q8WU39 189 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 RNF138Q8WVD3 245 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 NINJ1Q92982 152 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 TMBIM1Q969X1 311 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 EXOSC8Q96B26 276 aaKnown RBP13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 ZFP3Q96NJ6 502 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 SERHLQ9NQF3 203 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 MRPS18CQ9Y3D5 142 aaKnown RBP13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 MED12Q93074 2177 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 ABCA4P78363 2273 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 GOLGA8RI6L899 631 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 TSPAN2O60636 221 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 ERN1O75460 977 aaKnown RBP13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 REM1O75628 298 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 ANXA4P09525 319 aaPredicted RBP13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 CYP4B1P13584 511 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 DDCP20711 480 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 SRD5A2P31213 254 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 WNT3P56703 355 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 MRPS22P82650 360 aaKnown RBP13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 DAZAP2Q15038 168 aaPredicted RBP13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 FLYWCH1Q4VC44 716 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 KIF18BQ86Y91 864 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 FAM9CQ8IZT9 166 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 OR14L1PQ8NHC6 308 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 KAT2AQ92830 837 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 UCN2Q96RP3 112 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 RASSF1Q9NS23 344 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 TAS2R9Q9NYW1 312 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 TAS2R7Q9NYW3 318 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 JKAMPQ9P055 326 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 MAPRE3Q9UPY8 281 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 TIMM22Q9Y584 194 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 WIF1Q9Y5W5 379 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 NF1P21359 2839 aa13.07□□□□□ -0.32
SNRNP40-203ENST00000463988 DOCK7Q96N67 2140 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 HRNRQ86YZ3 2850 aaPredicted RBP13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 A0A087WV62 115 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 A6NNC1 897 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 MYO1GB0I1T2 1018 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 G3V2L1 256 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 FAM153BP0C7A2 387 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 MYL2P10916 166 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 KRT20P35900 424 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 ART1P52961 327 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 GFRA1P56159 465 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 CORO7P57737 925 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 SORDQ00796 357 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 ZNF763Q0D2J5 394 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 FAM153CQ494X1 144 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 SCIMPQ6UWF3 145 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 ZYG11AQ6WRX3 759 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 LARP4Q71RC2 724 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 IFNEQ86WN2 208 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 CCNYL1Q8N7R7 359 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 EIF1ADQ8N9N8 165 aaKnown RBP13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 METTL2AQ96IZ6 378 aaKnown RBP13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 BBS4Q96RK4 519 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 KCNA7Q96RP8 456 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 ADOQ96SZ5 270 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 TM9SF2Q99805 663 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 CLEC4MQ9H2X3 399 aaPredicted RBP13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 ANKRA2Q9H9E1 313 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 MID1IP1Q9NPA3 183 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 TAS2R10Q9NYW0 307 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 EMCNQ9ULC0 261 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 EDARQ9UNE0 448 aa13.06□□□□□ -0.32
SNRNP40-203ENST00000463988 MPDZO75970 2070 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 COQ9O75208 318 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 GLRA3O75311 464 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 RCBTB2O95199 551 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 GOSR1O95249 250 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 CHMP24386 653 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 IL12BP29460 328 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 DNAJB13P59910 316 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 EEF1A1P68104 462 aaKnown RBP13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 BTKQ06187 659 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 C2orf80Q0P641 193 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms