RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PLPPR2Q96GM1 343 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 ATOH8Q96SQ7 321 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 RBBP8Q99708 897 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 PINK1Q9BXM7 581 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 RNF122Q9H9V4 155 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 AHSPQ9NZD4 102 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 MAT2BQ9NZL9 334 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 PSME2Q9UL46 239 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 PLLPQ9Y342 182 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 ZNF175Q9Y473 711 aa13.04□□□□□ -0.32
SMC1A-204ENST00000463684 DSCAMO60469 2012 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 SYCE1LA8MT33 242 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 CXorf49A8MYA2 514 aaPredicted RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 TO15178 435 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ERAL1O75616 437 aaKnown RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 SEMA3DO95025 777 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 F12P00748 615 aaPredicted RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 PLAUP00749 431 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ATP1B1P05026 303 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 THBDP07204 575 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 CSNK2A2P19784 350 aaPredicted RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 GRK2P25098 689 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 FEN1P39748 380 aaKnown RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 B3GALT5-AS1P59052 145 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 EFR3AQ14156 821 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 SLMAPQ14BN4 828 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
SMC1A-204ENST00000463684 CCNYL2Q5T2Q4 361 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 RAET1LQ5VY80 246 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 FAM214BQ7L5A3 538 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 OR52R1Q8NGF1 315 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 IPPKQ9H8X2 491 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ZNF639Q9UID6 485 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 ADAM29Q9UKF5 820 aa13.03□□□□□ -0.32
SMC1A-204ENST00000463684 C1orf226A1L170 272 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 E7ESA3 106 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 LINC01387J3KSC0 135 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 PHF1O43189 567 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 SEC14L5O43304 696 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 CBX7O95931 251 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 LTA4HP09960 611 aaKnown RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 IL12BP29460 328 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 SPRP35270 261 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 GP5P40197 560 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 ARL1P40616 181 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 MAPK12P53778 367 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 GPX6P59796 221 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 RPS3AP61247 264 aaKnown RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 DR1Q01658 176 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 OCRLQ01968 901 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 PON3Q15166 354 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 TRMT12Q53H54 448 aaKnown RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 SLC48A1Q6P1K1 146 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 L3MBTL4Q8NA19 623 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 PYROXD1Q8WU10 500 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 AKAP1Q92667 903 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 GTPBP3Q969Y2 492 aaKnown RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 ZBED6CLQ96FA7 236 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 SLC35A4Q96G79 324 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 STMN4Q9H169 189 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 PLSCR4Q9NRQ2 329 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 GPR55Q9Y2T6 319 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-204ENST00000463684 RNF11Q9Y3C5 154 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 PCDHA9Q9Y5H5 950 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 ZNF780BQ9Y6R6 833 aa13.02□□□□□ -0.33
SMC1A-204ENST00000463684 ANK3Q12955 4377 aaKnown RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 A8MV72 311 aaPredicted RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 H0YC42 278 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 BCAS2O75934 225 aaPredicted RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 CLDN9O95484 217 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 FCGR2AP12318 317 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 GFAPP14136 432 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 HK1P19367 917 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 CRABP2P29373 138 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 SSTR1P30872 391 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 PIK3CGP48736 1102 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 EMDP50402 254 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 SUCLG1P53597 346 aaKnown RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 TPD52P55327 224 aaPredicted RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 CLDN15P56746 228 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 MRPS22P82650 360 aaKnown RBP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 DLG1Q12959 904 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 GTF2H2Q13888 395 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 SGCBQ16585 318 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 PFKFB4Q16877 469 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 GRTP1Q5TC63 336 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 GTF2H2CQ6P1K8 395 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 LARP4Q71RC2 724 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMC1A-204ENST00000463684 WFDC8Q8IUA0 241 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 KLHL7Q8IXQ5 586 aa13.01□□□□□ -0.33
SMC1A-204ENST00000463684 TRPC4APQ8TEL6 797 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms