RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	SPPL2C	Q8IUH8	684 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	WDR75	Q8IWA0	830 aa	Known RBP	13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	CHERP	Q8IWX8	916 aa	Known RBP	13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	KIRREL3	Q8IZU9	778 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	GHDC	Q8N2G8	530 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	SSC4D	Q8WTU2	575 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	ZNF75CP	Q92670	426 aa	Predicted RBP	13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	HGD	Q93099	445 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	MTERF3	Q96E29	417 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	HSPBAP1	Q96EW2	488 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	MARK4	Q96L34	752 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	ZNF597	Q96LX8	424 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	NODAL	Q96S42	347 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	IL1RL2	Q9HB29	575 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	GALNT9	Q9HCQ5	603 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	ASIC5	Q9NY37	505 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	CNIH4	Q9P003	139 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	TNFRSF10D	Q9UBN6	386 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	BOK	Q9UMX3	212 aa	Predicted RBP	13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	SLC5A6	Q9Y289	635 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675	SNX8	Q9Y5X2	465 aa		13.93	□□□□□ -0.18
SNU13-205	ENST00000463675		A0A1B0GTH9	108 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675		A1L4Q6	167 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	C2orf72	A6NCS6	295 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	PRAMEF25	A6NGN4	478 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	HDAC3	O15379	428 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	REM1	O75628	298 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	C6orf47	O95873	294 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	STS	P08842	583 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	LBP	P18428	481 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	PRPS1L1	P21108	318 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	IL12B	P29460	328 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	SOAT1	P35610	550 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	RPL3	P39023	403 aa	Known RBP	13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	MASP1	P48740	699 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	PSG6	Q00889	435 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	C4orf17	Q53FE4	359 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	KRTCAP3	Q53RY4	240 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	3e-7	■■■□□ 16.4
SNU13-205	ENST00000463675	GALNT10	Q86SR1	603 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	RIMKLA	Q8IXN7	391 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	FAM109A	Q8N4B1	249 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	DYDC1	Q8WWB3	177 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	COL21A1	Q96P44	957 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	MS4A4E	Q96PG1	132 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	ADO	Q96SZ5	270 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	OSBPL11	Q9BXB4	747 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	SLCO1B3	Q9NPD5	702 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	ZNF446	Q9NWS9	450 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	KLRF1	Q9NZS2	232 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	FLRT3	Q9NZU0	649 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675	PCNX1	Q96RV3	2341 aa		13.92	□□□□□ -0.18
SNU13-205	ENST00000463675		A0A1W2PRB8	838 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	GXYLT2	A0PJZ3	443 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	C17orf51	A8MQB3	221 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	GNB5	O14775	395 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	T	O15178	435 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	GDF1	P27539	372 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	KRT20	P35900	424 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	CASP3	P42574	277 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	PPP2R2A	P63151	447 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	SLC9B1	Q4ZJI4	515 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	NXN	Q6DKJ4	435 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	OR4F3	Q6IEY1	312 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	CD163	Q86VB7	1156 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	CLECL1	Q8IZS7	167 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	NUP43	Q8NFH3	380 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	OR5AK3P	Q8NH89	298 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	LRRC8C	Q8TDW0	803 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	PIK3R3	Q92569	461 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	JADE3	Q92613	823 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	FAM120B	Q96EK7	910 aa	Known RBP	13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	RMND5B	Q96G75	393 aa	Predicted RBP	13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	YIPF4	Q9BSR8	244 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	DUSP26	Q9BV47	211 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	DPY30	Q9C005	99 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	SLC6A15	Q9H2J7	730 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	CXorf36	Q9H7Y0	433 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	ZDHHC11	Q9H8X9	412 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	ZFP64	Q9NPA5	681 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	ATAD3A	Q9NVI7	634 aa		13.91	□□□□□ -0.18
SNU13-205	ENST00000463675	MED12	Q93074	2177 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	UQCRHL	A0A096LP55	91 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	TRPC5OS	A6NMA1	111 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	KLF11	O14901	512 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	CFLAR	O15519	480 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	TSPAN2	O60636	221 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	ZG16	O60844	167 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	ICOSLG	O75144	302 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	TRIM3	O75382	744 aa	Predicted RBP	13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	LDLR	P01130	860 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	TPO	P07202	933 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	ACP2	P11117	423 aa		13.9	□□□□□ -0.18
SNU13-205	ENST00000463675	DDX5	P17844	614 aa	Known RBP	13.9	□□□□□ -0.18

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