RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 MROH7-TTC4A0A0A0MT08 1334 aa-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 MAP3K15Q6ZN16 1313 aa-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 IGSF9BQ9UPX0 1349 aa-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 NBEAL2Q6ZNJ1 2754 aa-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 MAST4O15021 2626 aa-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 USP24Q9UPU5 2620 aa-0.17□□□□□ -2.44
TMEM56-204ENST00000463375 IGLV3-12A0A075B6K2 115 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 A0A0A6YYD4 124 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 CCDC162PA2VCL2 907 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TSPY2A6NKD2 308 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 DHRS7CA6NNS2 312 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 A8MUU9 505 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 K7ERI5 159 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 FLRT2O43155 660 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 EFNA2O43921 213 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TSPAN2O60636 221 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 KLF8O95600 359 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 PCCBP05166 539 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 OR52Z1P0C646 297 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TSPY3P0CV98 308 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TSPY4P0CV99 314 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TSPY8P0CW00 308 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TSPY10P0CW01 314 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 NF2P35240 595 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 NSFP46459 744 aaKnown RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 MT4P47944 62 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 APOC4P55056 127 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 ARF3P61204 181 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 PSMC6P62333 389 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 ARF1P84077 181 aaKnown RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 MC1RQ01726 317 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 PUDPQ08623 228 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 GK2Q14410 553 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 LBHQ53QV2 105 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 SAXO2Q658L1 398 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 OR5M10Q6IEU7 315 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 NANOGP8Q6NSW7 305 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 CYP4V2Q6ZWL3 525 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 DNAAF5Q86Y56 855 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 WDR49Q8IV35 697 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 OR9A1PQ8NGU1 263 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 RAET1EQ8TD07 263 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 SAP25Q8TEE9 199 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 TMEM158Q8WZ71 300 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 HAVCR1Q96D42 359 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 LINC00615Q96LM1 132 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 CCDC106Q9BWC9 280 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 GTPBP2Q9BX10 602 aaKnown RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 GPR174Q9BXC1 333 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 CXXC4Q9H2H0 198 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 IL1RAPL2Q9NP60 686 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 ANAPC2Q9UJX6 822 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 VWFP04275 2813 aa-0.18□□□□□ -2.44
TMEM56-204ENST00000463375 ATP6AP2A0A1C7CYW4 349 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 GTPBP10A4D1E9 387 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 MEI4A8MW99 385 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 OAS1P00973 400 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 CSF2P04141 144 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 SPP1P10451 314 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 PRDX3P30048 256 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 IER3P46695 156 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 GMPSP49915 693 aaPredicted RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 METAP1P53582 386 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 CSE1LP55060 971 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 VCPP55072 806 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 KLHL30Q0D2K2 578 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 CETN1Q12798 172 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 P2RY14Q15391 338 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 UBE2SQ16763 222 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 PIGGQ5H8A4 983 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 SMARCD3Q6STE5 483 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 ACP7Q6ZNF0 438 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 HSD11B1LQ7Z5J1 315 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 CPXCR1Q8N123 301 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 CCDC197Q8NCU1 140 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 ZNF461Q8TAF7 563 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 SLC26A6Q9BXS9 759 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 TEX13AQ9BXU3 409 aaPredicted RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 UNC45AQ9H3U1 944 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 MINDY3Q9H8M7 445 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 NUFIP1Q9UHK0 495 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 ZNF215Q9UL58 517 aaPredicted RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 NEUROG3Q9Y4Z2 214 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 KIAA1109Q2LD37 5005 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 SRRM2Q9UQ35 2752 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 COL6A5A8TX70 2615 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 SONP18583 2426 aaKnown RBP-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 COL12A1Q99715 3063 aa-0.19□□□□□ -2.44
TMEM56-204ENST00000463375 FRAS1Q86XX4 4008 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 YEATS2Q9ULM3 1422 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 RYR1P21817 5038 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 SETD2Q9BYW2 2564 aaPredicted RBP-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 ADGRL1O94910 1474 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 IGHV1OR15-1A0A075B7D0 117 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 A0A0A6YYC8 382 aaPredicted RBP-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 TUBAL3A6NHL2 446 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 CCDC188H7C350 402 aa-0.2□□□□□ -2.44
TMEM56-204ENST00000463375 I3L1I5 382 aaPredicted RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms