RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 OR2T12Q8NG77 320 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 NUBPLQ8TB37 319 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 SLC38A5Q8WUX1 472 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 MAL2Q969L2 176 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 TP53INP1Q96A56 240 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 OTUB1Q96FW1 271 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 VPS50Q96JG6 964 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 WWTR1Q9GZV5 400 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 NXF5Q9H1B4 397 aaKnown RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ZNF160Q9HCG1 818 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 SUCOQ9UBS9 1254 aaKnown RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 SLC7A8Q9UHI5 535 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 GXYLT2A0PJZ3 443 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 MASP2O00187 686 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 NKX2-8O15522 239 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ZFAND5O76080 213 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 AGR2O95994 175 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 GUSBP08236 651 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ALOX5P09917 674 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ICAM2P13598 275 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 NQO1P15559 274 aaKnown RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 GABRA3P34903 492 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 TRHRP34981 398 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 PCGF2P35227 344 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 PCBP3P57721 371 aaKnown RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ZNF155Q12901 538 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 SYPL1Q16563 259 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 BTBD16Q32M84 506 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ARHGAP11BQ3KRB8 267 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 ERICH5Q6P6B1 374 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 METTL25Q8N6Q8 603 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 FBXO30Q8TB52 745 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 SLC9A6Q92581 669 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 CDS1Q92903 461 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 MCUR1Q96AQ8 359 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 LCORQ96JN0 433 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 SDF2Q99470 211 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 KCTD14Q9BQ13 255 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-202ENST00000463060 SAP130Q9H0E3 1048 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 PCDHAC1Q9H158 963 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 LIPT1Q9Y234 373 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 POMPQ9Y244 141 aa13.28□□□□□ -0.28
COL6A1-202ENST00000463060 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 CFAP73A6NFT4 308 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 FRG2CA6NGY1 282 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 A8MVJ9 347 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PEX12O00623 359 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ZNF354AO60765 605 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ZIC2O95409 532 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 NADKO95544 446 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 IGKV1D-16P01601 117 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 SERPINA7P05543 415 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 GGT1P19440 569 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 TCN1P20061 433 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PIGAP37287 484 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 SOX8P57073 446 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 CDK6Q00534 326 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 TRAP1Q12931 704 aaKnown RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 CYP27C1Q4G0S4 372 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 DCAF10Q5QP82 559 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ATP1A1-AS1Q5TC04 95 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PRAMEF8Q5VWM4 474 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PRAMEF7Q5VXH5 474 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 CCDC80Q76M96 950 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 SLC29A4Q7RTT9 530 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 SLC44A2Q8IWA5 706 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ANKFN1Q8N957 763 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 C11orf65Q8NCR3 313 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 OR4N2Q8NGD1 307 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 OR5L2Q8NGL0 311 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 KCNE4Q8WWG9 221 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 THAP4Q8WY91 577 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PSMF1Q92530 271 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PIK3R3Q92569 461 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ASB9Q96DX5 294 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 TRNT1Q96Q11 434 aaKnown RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 BTBD2Q9BX70 525 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 RSPO3Q9BXY4 272 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 CCDC86Q9H6F5 360 aaKnown RBP13.27□□□□□ -0.29
COL6A1-202ENST00000463060 RUBCNLQ9H714 662 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 BCL2L10Q9HD36 194 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 EXD2Q9NVH0 621 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 FBXO34Q9NWN3 711 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ANGPTL2Q9UKU9 493 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ZNF451Q9Y4E5 1061 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 PCDHGB3Q9Y5G1 929 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 NCOR2Q9Y618 2525 aa13.27□□□□□ -0.29
COL6A1-202ENST00000463060 ACOX3O15254 700 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 KLK10O43240 276 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 KCNK2O95069 426 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 PGM3O95394 542 aa13.26□□□□□ -0.29
COL6A1-202ENST00000463060 APC2O95996 2303 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms