RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NCOA6Q14686 2063 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 TEX15Q9BXT5 2789 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 A0A087WV62 115 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 A0A1B0GVC2 190 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 TMEM120BA0PK00 339 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 LRRC3CA6NJW4 275 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 AQP7O14520 342 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 SNX4O95219 450 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 ABCB1P08183 1280 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 DHRS4L1P0CG22 281 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 COX6B1P14854 86 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 NAGAP17050 411 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 SLC1A6P48664 564 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 MAGOHP61326 146 aaKnown RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 STX3Q13277 289 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 MPP2Q14168 576 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 CDSNQ15517 529 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 ZNHIT3Q15649 155 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 GXYLT1Q4G148 440 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 CES4AQ5XG92 561 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 ZNF551Q7Z340 670 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 NUP54Q7Z3B4 507 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 R3HCC1LQ7Z5L2 792 aaKnown RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 KIRREL3Q8IZU9 778 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 OR5M9Q8NGP3 310 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 ZBED6CLQ96FA7 236 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 C3orf30Q96M34 536 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 VSTM2LQ96N03 204 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 COL21A1Q96P44 957 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 OSBPL11Q9BXB4 747 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 ZNF395Q9H8N7 513 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 PNPLA3Q9NST1 481 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 ACAD8Q9UKU7 415 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 GPR55Q9Y2T6 319 aaPredicted RBP14.1□□□□□ -0.15
VARS-219ENST00000461328 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 NOTCH2Q04721 2471 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 EML6Q6ZMW3 1958 aa14.1□□□□□ -0.15
VARS-219ENST00000461328 TRGV5A0A0B4J1U4 118 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 ANKRD33BA6NCL7 494 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 PRAMEF25A6NGN4 478 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 FIGNL2A6NMB9 653 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 GNB5O14775 395 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 SCAMP2O15127 329 aaKnown RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 TO15178 435 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 SUSD5O60279 629 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 HCN1O60741 890 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 ABCB7O75027 752 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 UGT2B11O75310 529 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 SNUPNO95149 360 aaKnown RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 SNRPB2P08579 225 aaKnown RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 RFPL3SP0C7P2 107 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 RPL3P39023 403 aaKnown RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 CASP3P42574 277 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 MANFP55145 182 aaKnown RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 PSPHP78330 225 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 TOMM20Q15388 145 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 ZNF385BQ569K4 471 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 EMC4Q5J8M3 183 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 IL23RQ5VWK5 629 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 ZNF585AQ6P3V2 769 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 NPSR1Q6W5P4 371 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 LARP4Q71RC2 724 aaKnown RBP eCLIP14.09□□□□□ -0.15
VARS-219ENST00000461328 MARVELD2Q8N4S9 558 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 SARAFQ96BY9 339 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 TMCO6Q96DC7 493 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 ELP4Q96EB1 424 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 ZNF764Q96H86 408 aaPredicted RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 ANGPTL4Q9BY76 406 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 TMBIM4Q9HC24 238 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 EQTNQ9NQ60 294 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 TNFRSF10DQ9UBN6 386 aa14.09□□□□□ -0.15
VARS-219ENST00000461328 C19orf53Q9UNZ5 99 aaPredicted RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 EIF3LQ9Y262 564 aaKnown RBP14.09□□□□□ -0.15
VARS-219ENST00000461328 UPK1AO00322 258 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 PLOD2O00469 737 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 TBX19O60806 448 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 TRIM3O75382 744 aaPredicted RBP14.08□□□□□ -0.16
VARS-219ENST00000461328 TRAPPC6AO75865 159 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 CT45A8P0DMV1 189 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 CT45A9P0DMV2 189 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 PRPS2P11908 318 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 EFNA1P20827 205 aaPredicted RBP14.08□□□□□ -0.16
VARS-219ENST00000461328 PTGER4P35408 488 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 TRPC1P48995 793 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 RPL14P50914 215 aaKnown RBP14.08□□□□□ -0.16
VARS-219ENST00000461328 MAD2L1Q13257 205 aaPredicted RBP14.08□□□□□ -0.16
VARS-219ENST00000461328 PDE7AQ13946 482 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 EFR3AQ14156 821 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 CASP8Q14790 479 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 PTGR1Q14914 329 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 CT45A2Q5DJT8 189 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 C6orf136Q5SQH8 315 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 WLSQ5T9L3 541 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 DESI1Q6ICB0 168 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 ANGPTL8Q6UXH0 198 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 MCEMP1Q8IX19 187 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 OR2L13Q8N349 312 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 RPRMLQ8N4K4 120 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 ASB5Q8WWX0 329 aa14.08□□□□□ -0.16
VARS-219ENST00000461328 RND1Q92730 232 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms