RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TEX47Q8TBZ9 253 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 RNFT2Q96EX2 444 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 SLC30A2Q9BRI3 323 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 SAP130Q9H0E3 1048 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 TIGARQ9NQ88 270 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 TAS2R7Q9NYW3 318 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 KLHL3Q9UH77 587 aa17.03■□□□□ 0.32
HPS3-202ENST00000460120 SCN2AQ99250 2005 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 CEP290O15078 2479 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 CACNB4O00305 520 aaPredicted RBP17.02■□□□□ 0.32
HPS3-202ENST00000460120 CCNYL3P0C7X3 344 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 PIPP12273 146 aaPredicted RBP17.02■□□□□ 0.32
HPS3-202ENST00000460120 GNSP15586 552 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 CMPK1P30085 196 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 MPIP34949 423 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 PRR5P85299 388 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 RHAGQ02094 409 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 SELENBP1Q13228 472 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 ZNF776Q68DI1 518 aaPredicted RBP17.02■□□□□ 0.32
HPS3-202ENST00000460120 PHC2Q8IXK0 858 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 TTLQ8NG68 377 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 PHOSPHO2Q8TCD6 241 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 ELP4Q96EB1 424 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 C1GALT1C1Q96EU7 318 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 SDHCQ99643 169 aaPredicted RBP17.02■□□□□ 0.32
HPS3-202ENST00000460120 SLC38A1Q9H2H9 487 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 GIMAP4Q9NUV9 329 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 GDE1Q9NZC3 331 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 POU2F3Q9UKI9 436 aa17.02■□□□□ 0.32
HPS3-202ENST00000460120 ZIC2O95409 532 aaPredicted RBP17.02■□□□□ 0.31
HPS3-202ENST00000460120 TSPAN19P0C672 248 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 SOX18P35713 384 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 RFX3P48380 749 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 TFF2Q03403 129 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 NCF4Q15080 339 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 DUSP6Q16828 381 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 CAMKK1Q8N5S9 505 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 FRMD1Q8N878 549 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 CDS1Q92903 461 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 SPATA5L1Q9BVQ7 753 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 POLMQ9NP87 494 aaPredicted RBP17.02■□□□□ 0.31
HPS3-202ENST00000460120 SSR3Q9UNL2 185 aa17.02■□□□□ 0.31
HPS3-202ENST00000460120 NPIPA5A0A0B4J1W7 369 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 CENPVL1A0A0U1RR11 272 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 NPIPA7E9PJI5 369 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 PROM1O43490 865 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 RAB36O95755 333 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 NPIPA8P0DM63 369 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 FUT1P19526 365 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 RPS25P62851 125 aaKnown RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 AMIGO1Q86WK6 493 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 NELL2Q99435 816 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 TIMM29Q9BSF4 260 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 PBX4Q9BYU1 374 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 ANKMY1Q9P2S6 941 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 MUTYHQ9UIF7 546 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 STUB1Q9UNE7 303 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 YBX2Q9Y2T7 364 aaKnown RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 SPEGQ15772 3267 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 EMC8O43402 210 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 SLC2A10O95528 541 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 MYL12AP19105 171 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 SSTR4P31391 388 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 SMSP52788 366 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 RGS8P57771 180 aaPredicted RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 TRA2BP62995 288 aaKnown RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 HNRNPA0Q13151 305 aaKnown RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 MLC1Q15049 377 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 ATAD3BQ5T9A4 648 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 MEDAGQ5VYS4 303 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 TUBA3EQ6PEY2 450 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 BHLHB9Q6PI77 547 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 C19orf48Q6RUI8 117 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 FAM92BQ6ZTR7 304 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 PLEKHM3Q6ZWE6 761 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 Q8N9G6 341 aaPredicted RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 OR7G2Q8NG99 324 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 ADAMTS15Q8TE58 950 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 NACC2Q96BF6 587 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 C1QTNF2Q9BXJ5 285 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 CES1P1Q9UKY3 287 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 SLC17A4Q9Y2C5 497 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 CHST2Q9Y4C5 530 aa17.01■□□□□ 0.31
HPS3-202ENST00000460120 NUP210Q8TEM1 1887 aaPredicted RBP17.01■□□□□ 0.31
HPS3-202ENST00000460120 GSAPA4D1B5 854 aa17■□□□□ 0.31
HPS3-202ENST00000460120 K7EQS6 105 aa17■□□□□ 0.31
HPS3-202ENST00000460120 SNX4O95219 450 aa17■□□□□ 0.31
HPS3-202ENST00000460120 ZNF24P17028 368 aa17■□□□□ 0.31
HPS3-202ENST00000460120 COL9A1P20849 921 aa17■□□□□ 0.31
HPS3-202ENST00000460120 ADPRHP54922 357 aa17■□□□□ 0.31
HPS3-202ENST00000460120 GPR68Q15743 365 aa17■□□□□ 0.31
HPS3-202ENST00000460120 TMEM201Q5SNT2 666 aa17■□□□□ 0.31
HPS3-202ENST00000460120 CCDC190Q86UF4 302 aa17■□□□□ 0.31
HPS3-202ENST00000460120 OR4F15Q8NGB8 312 aa17■□□□□ 0.31
HPS3-202ENST00000460120 OR56A1Q8NGH5 318 aa17■□□□□ 0.31
HPS3-202ENST00000460120 TMEM255BQ8WV15 326 aa17■□□□□ 0.31
HPS3-202ENST00000460120 OR1E3Q8WZA6 343 aa17■□□□□ 0.31
HPS3-202ENST00000460120 SLC35A4Q96G79 324 aa17■□□□□ 0.31
HPS3-202ENST00000460120 POLDIP3Q9BY77 421 aaKnown RBP17■□□□□ 0.31
HPS3-202ENST00000460120 KNL1Q8NG31 2342 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms