RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KRT20P35900 424 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 ALDH9A1P49189 494 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 LHX2P50458 406 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 MRPS22P82650 360 aaKnown RBP19.54■□□□□ 0.72
CPNE1-220ENST00000458038 DESI1Q6ICB0 168 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 C8orf74Q6P047 294 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 LETMD1Q6P1Q0 360 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 LUZP2Q86TE4 346 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 C1orf52Q8N6N3 182 aaKnown RBP19.54■□□□□ 0.72
CPNE1-220ENST00000458038 TMBIM1Q969X1 311 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 C18orf12Q96KH6 178 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 SHCBP1LQ9BZQ2 653 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 TRPS1Q9UHF7 1281 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 UTS2RQ9UKP6 389 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 WIF1Q9Y5W5 379 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 ESYT3A0FGR9 886 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 PLOD2O00469 737 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 MSTNO14793 375 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 ARHGEF9O43307 516 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 KRT6AP02538 564 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 KRT6BP04259 564 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 PCSK2P16519 638 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 KRT6CP48668 564 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 SLC7A5Q01650 507 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 ERCC6LQ2NKX8 1250 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 OR2A2Q6IF42 318 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 GRAMD2AQ8IUY3 354 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 WFDC11Q8NEX6 87 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 RDH11Q8TC12 318 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 G6PC3Q9BUM1 346 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 EHD3Q9NZN3 535 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 MCM8Q9UJA3 840 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 ZNF180Q9UJW8 692 aa19.53■□□□□ 0.72
CPNE1-220ENST00000458038 FAM171A2A8MVW0 826 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 ESRRBO95718 433 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 ZNF708P17019 499 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 PNLIPRP2P54317 469 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 MRPS35P82673 323 aaKnown RBP19.52■□□□□ 0.72
CPNE1-220ENST00000458038 DUSP2Q05923 314 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 CKAP4Q07065 602 aaKnown RBP19.52■□□□□ 0.72
CPNE1-220ENST00000458038 CSTF3Q12996 717 aaKnown RBP19.52■□□□□ 0.72
CPNE1-220ENST00000458038 RASA2Q15283 850 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 CHMP1BQ7LBR1 199 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 CCDC116Q8IYX3 515 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 MMP21Q8N119 569 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 SIMC1Q8NDZ2 872 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 SFXN2Q96NB2 322 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 ADOQ96SZ5 270 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 PAFAH2Q99487 392 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 STMN4Q9H169 189 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-220ENST00000458038 PFDN4Q9NQP4 134 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 GIMAP4Q9NUV9 329 aa19.52■□□□□ 0.72
CPNE1-220ENST00000458038 HCRTR2O43614 444 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 TSPAN2O60636 221 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 CT45A8P0DMV1 189 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 CT45A9P0DMV2 189 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 IL12BP29460 328 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 HSD17B3P37058 310 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 CDH13P55290 713 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 CLDN18P56856 261 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 NKX6-1P78426 367 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-220ENST00000458038 HEPACAMQ14CZ8 416 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 LTB4RQ15722 352 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 CT45A2Q5DJT8 189 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 ZNF628Q5EBL2 1059 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 LARP4Q71RC2 724 aaKnown RBP eCLIP19.51■□□□□ 0.71
CPNE1-220ENST00000458038 RNF138Q8WVD3 245 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 TAS2R9Q9NYW1 312 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 DKKL1Q9UK85 242 aa19.51■□□□□ 0.71
CPNE1-220ENST00000458038 A0A1B0GTL3 188 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 A0A1W2PNV4 684 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 A8MT66 165 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 LINC01387J3KSC0 135 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 MANBAO00462 879 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 PPP6CO00743 305 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 PLOD3O60568 738 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 ULK1O75385 1050 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 INHBBP09529 407 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 PEPDP12955 493 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 GRK2P25098 689 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 DPP4P27487 766 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 ADSLP30566 484 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-220ENST00000458038 MPIP34949 423 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 GSTM5P46439 218 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 STARP49675 285 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 DSCR4P56555 118 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-220ENST00000458038 EEFSECP57772 596 aaKnown RBP19.5■□□□□ 0.71
CPNE1-220ENST00000458038 CLCQ05315 142 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 SYT10Q6XYQ8 523 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 RPS27LQ71UM5 84 aaKnown RBP19.5■□□□□ 0.71
CPNE1-220ENST00000458038 GCNT2Q8N0V5 402 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 PIGTQ969N2 578 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 VSTM2LQ96N03 204 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 PIP5K1AQ99755 562 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 HEY2Q9UBP5 337 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 ZNF225Q9UK10 706 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 FBXL2Q9UKC9 423 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 STK38LQ9Y2H1 464 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 TESMINQ9Y4I5 508 aa19.5■□□□□ 0.71
CPNE1-220ENST00000458038 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms