RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 FAM159BA6NKW6 160 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 C16orf97H3BN30 126 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 SEMA3DO95025 777 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 MTHFD2P13995 350 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 GFAPP14136 432 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 TCP1P17987 556 aaKnown RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 CRABP2P29373 138 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 KCNJ5P48544 419 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 HMGCS1Q01581 520 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 GTF2H2Q13888 395 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 PFKFB4Q16877 469 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 GRTP1Q5TC63 336 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 ZNF474Q6S9Z5 364 aaPredicted RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 FAM111BQ6SJ93 734 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 PLEKHM3Q6ZWE6 761 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 ADCY4Q8NFM4 1077 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 ZC3HAV1LQ96H79 300 aaKnown RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 OPN3Q9H1Y3 402 aaPredicted RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 IPPKQ9H8X2 491 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 SAYSD1Q9NPB0 183 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 AHSPQ9NZD4 102 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 PRODH2Q9UF12 536 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 FBXL2Q9UKC9 423 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 ADAM29Q9UKF5 820 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 PLLPQ9Y342 182 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 RNF11Q9Y3C5 154 aa12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 MRPS18CQ9Y3D5 142 aaKnown RBP12.97□□□□□ -0.33
UPF3AP2-201ENST00000457924 COL6A5A8TX70 2615 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 SLC22A20A6NK97 555 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 GUCY1B2O75343 617 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 CRLF1O75462 422 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 CLDN9O95484 217 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ATP1B1P05026 303 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 KLK1P06870 262 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 DRD5P21918 477 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ARL1P40616 181 aaPredicted RBP12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 PIK3CGP48736 1102 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ALDH18A1P54886 795 aaKnown RBP12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 BCL2A1Q16548 175 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 CCNYL2Q5T2Q4 361 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 C3orf62Q6ZUJ4 267 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 CYS1Q717R9 158 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 PAGE2Q7Z2X7 111 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ZNF550Q7Z398 422 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 GOLGA7Q7Z5G4 137 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 OR52R1Q8NGF1 315 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 RHEBL1Q8TAI7 183 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 NXNL1Q96CM4 212 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ZNF845Q96IR2 970 aaPredicted RBP12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 MAT2BQ9NZL9 334 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ZNF232Q9UNY5 417 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 ACOT9Q9Y305 439 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 SNX24Q9Y343 169 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 WIF1Q9Y5W5 379 aa12.96□□□□□ -0.33
UPF3AP2-201ENST00000457924 C1orf226A1L170 272 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 FRG2CA6NGY1 282 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 OR6C70A6NIJ9 312 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 TO15178 435 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 ERAL1O75616 437 aaKnown RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 REM1O75628 298 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 PEPDP12955 493 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 TCEA1P23193 301 aaKnown RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 DPP4P27487 766 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 PPICP45877 212 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 MAPK12P53778 367 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 SIRPAP78324 504 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 MGAT2Q10469 447 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 OR5M10Q6IEU7 315 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 SLC48A1Q6P1K1 146 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 UBQLNLQ8IYU4 475 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 GBP7Q8N8V2 638 aaPredicted RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 TMEM171Q8WVE6 324 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 TMBIM1Q969X1 311 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 ATP6V1E2Q96A05 226 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 MARK4Q96L34 752 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 PIGQQ9BRB3 760 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 LRRC1Q9BTT6 524 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZNF639Q9UID6 485 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 PCDHA9Q9Y5H5 950 aa12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 TNPO3Q9Y5L0 923 aaKnown RBP12.95□□□□□ -0.34
UPF3AP2-201ENST00000457924 A0A087X1B8 175 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 CCDC189A1A4V9 331 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 LRRC14BA6NHZ5 514 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 CCDC188H7C350 402 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 EIF3HO15372 352 aaKnown RBP eCLIP12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 EMC8O43402 210 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZIC3O60481 467 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms