RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 VTCN1Q7Z7D3 282 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF761Q86XN6 746 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM105Q8N8V8 129 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 TRUB1Q8WWH5 349 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 MMABQ96EY8 250 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 OTUB1Q96FW1 271 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SLC35A4Q96G79 324 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 HRASLS5Q96KN8 279 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 CSF3RQ99062 836 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 SDF2Q99470 211 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FUZQ9BT04 418 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ALOXE3Q9BYJ1 711 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 IRF2BPLQ9H1B7 796 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 WDR54Q9H977 334 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 Q9N2J8 555 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 VCX3AQ9NNX9 186 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 PAPOLBQ9NRJ5 636 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 LANCL2Q9NS86 450 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 FGF21Q9NSA1 209 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 KRT84Q9NSB2 600 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEM74BQ9NUR3 256 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 PDP1Q9P0J1 537 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 AKAP7Q9P0M2 348 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 C5AR2Q9P296 337 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 KIF17Q9P2E2 1029 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 TMEFF2Q9UIK5 374 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 PPIEQ9UNP9 301 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 ABCG2Q9UNQ0 655 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 MRPS2Q9Y399 296 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 WDR45Q9Y484 360 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 HEMK1Q9Y5R4 338 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 U3KQA8 63 aa6.38□□□□□ -1.39
ECHDC1-210ENST00000454859 C5orf42Q9H799 3197 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 A0A0A6YYC8 382 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 B4E171 279 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 I3L1I5 382 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF701M0R085 212 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 M0R3G1 203 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PDLIM1O00151 329 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TO15178 435 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PRAMEF10O60809 474 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SDC3O75056 442 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 UGT2B17O75795 530 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CHRM4P08173 479 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 NID1P14543 1247 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 S1PR1P21453 382 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 DRD5P21918 477 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CBLP22681 906 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CSF2RBP32927 897 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TSPAN7P41732 249 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PPICP45877 212 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SPIBQ01892 262 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 FUT5Q11128 374 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 APOFQ13790 326 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TRAM2Q15035 370 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF141Q15928 474 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF311Q5JNZ3 666 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PLA2G2CQ5R387 149 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 DCST1Q5T197 706 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 DCST2Q5T1A1 773 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 OTUD3Q5T2D3 398 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TTC33Q6PID6 262 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 NUP54Q7Z3B4 507 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 RANBP3LQ86VV4 465 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TAGAPQ8N103 731 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CLDN22Q8N7P3 220 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 COX18Q8N8Q8 333 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 GPR32P1Q8NGA4 272 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 OR8K3Q8NH51 312 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 OR52P1PQ8NH57 321 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 IPCEF1Q8WWN9 437 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 MAGED4Q96JG8 741 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CNBD2Q96M20 576 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 HS6ST2Q96MM7 605 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 VSTM2LQ96N03 204 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ZNF559Q9BR84 538 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PRRG3Q9BZD7 231 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 AMBRA1Q9C0C7 1298 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TOR3AQ9H497 397 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 FBXO8Q9NRD0 319 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PLCXD1Q9NUJ7 323 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 IRAK4Q9NWZ3 460 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TESQ9UGI8 421 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 RARRES3Q9UL19 164 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 PCDHGB6Q9Y5F9 930 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 TCRBV16S1A1N1A0A5B0 115 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SH3D21A4FU49 640 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 hCG_2039718K7EN88 272 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 AP3D1O14617 1153 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 POLR1CO15160 346 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 HS6ST1O60243 411 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SMNDC1O75940 238 aaKnown RBP eCLIP6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 SNAP29O95721 258 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CBX7O95931 251 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CLPTM1O96005 669 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 CFIP05156 583 aa6.37□□□□□ -1.39
ECHDC1-210ENST00000454859 ACP2P11117 423 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms