RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 MYL12AP19105 171 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.535e-10■■■■□ 20.2
ECHDC1-209ENST00000454591 SLC9A3P48764 834 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 SEPHS1P49903 392 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 RUNX1T1Q06455 604 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 SGCGQ13326 291 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 GPM6BQ13491 265 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 ZNF79Q15937 498 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 SNAPC1Q16533 368 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 FLYWCH1Q4VC44 716 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 ZNF311Q5JNZ3 666 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 AADACL4Q5VUY2 407 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 AGAP6Q5VW22 663 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 CDC73Q6P1J9 531 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 TMPRSS11AQ6ZMR5 421 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 USP30Q70CQ3 517 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 CCDC116Q8IYX3 515 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 IQCF1Q8N6M8 205 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 GDPD1Q8N9F7 314 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 OR8D4Q8NGM9 314 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 PIGXQ8TBF5 258 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 HTRA1Q92743 480 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 PMM1Q92871 262 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 OSTF1Q92882 214 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 RFKQ969G6 155 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 TM4SF19Q96DZ7 209 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 ABHD8Q96I13 439 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 AGAP4Q96P64 663 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 NELL2Q99435 816 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 ARHGAP9Q9BRR9 750 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 SLC17A9Q9BYT1 436 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 OSGEPL1Q9H4B0 414 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 EVA1AQ9H8M9 152 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 POLMQ9NP87 494 aaPredicted RBP11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 KLHL28Q9NXS3 571 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 KCNK6Q9Y257 313 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 CMAHPQ9Y471 501 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 SNRNP200O75643 2136 aaKnown RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 TRDV1A0A1B0GX56 115 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 A0A1W2PP55 124 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 ERAL1O75616 437 aaKnown RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 PAK4O96013 591 aaPredicted RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 IGHA1P01876 353 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 SERPIND1P05546 499 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 THBS1P07996 1170 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 CERS1P27544 350 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 GABRA5P31644 462 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 BUD31P41223 144 aaPredicted RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 KIR2DL1P43626 348 aaPredicted RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 RPS5P46782 204 aaKnown RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 MTNR1AP48039 350 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 TPTEP56180 551 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 TAS2R41P59536 307 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 BDH1Q02338 343 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 LRRC32Q14392 662 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 FAM214AQ32MH5 1076 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 C18orf63Q68DL7 685 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 XKRXQ6PP77 449 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 PAQR6Q6TCH4 344 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 TMEM107Q6UX40 140 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 VN1R4Q7Z5H5 301 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 ANKK1Q8NFD2 765 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 OR52N1Q8NH53 320 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 C16orf58Q96GQ5 468 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 MS4A4EQ96PG1 132 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 GABRG3Q99928 467 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 KCNS3Q9BQ31 491 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 PLA2G12AQ9BZM1 189 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 HOXD1Q9GZZ0 328 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 MTHFD2LQ9H903 347 aaPredicted RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 EXOSC4Q9NPD3 245 aaKnown RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 PHF11Q9UIL8 331 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 KCNE3Q9Y6H6 103 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 ZNF780BQ9Y6R6 833 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 DOCK9Q9BZ29 2069 aa11.73□□□□□ -0.53
ECHDC1-209ENST00000454591 ANTXRLA6NF34 631 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 WASHC1A8K0Z3 465 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 SLC30A4O14863 429 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 PRKRAO75569 313 aaKnown RBP11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 ASGR2P07307 311 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 CHRM5P08912 532 aaPredicted RBP11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 MSL3P1P0C860 447 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 LIMS3P0CW19 117 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 LIMS4P0CW20 117 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 RPS4Y1P22090 263 aaKnown RBP11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 DGKEP52429 567 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 TNFRSF17Q02223 184 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 CHRNEQ04844 493 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 RGS1Q08116 209 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 ASAH1Q13510 395 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 GPR50Q13585 617 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 RIN1Q13671 783 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 KRT33BQ14525 404 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 KCNJ8Q15842 424 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 ARHGAP11BQ3KRB8 267 aa11.72□□□□□ -0.53
ECHDC1-209ENST00000454591 ITPRIPL2Q3MIP1 535 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms